Family Search for PF07013 (DUF1314)

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PF07013 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

ORF2_VZVO / Q4JQX3 Membrane protein 2; Membrane ORF2 protein from Varicella-zoster virus (strain Oka vaccine) (HHV-3) (Human herpesvirus 3) (see paper)
P09267 Membrane protein 2 from Varicella-zoster virus (strain Dumas)
Aligns to 39:217 / 238 (75.2%), covers 100.0% of PF07013, 328.6 bits

• The genome of a very virulent Marek's disease virus
  Tulman, Journal of virology 2000
  • “...337 1,255 115 1,195 1,040 1,999 861 1,407 186 143 AF030027 P09267 185 (43) FHV-1 345 (46) 259 (66) EHV-1 FPV 120 (40) FHV-1 EHV-1 229 317 P28964 210 195 1,009...”

MDV071 myristylated tegument protein CIRC from Gallid alphaherpesvirus 2
Aligns to 13:183 / 194 (88.1%), covers 100.0% of PF07013, 314.1 bits

• Viral proteogenomic and expression profiling during productive replication of a skin-tropic herpesvirus in the natural host
  Volkening, PLoS pathogens 2023
  • “...limitations. Similarly, MDV072.5 (UL56) lies in a transcript cluster between MDV073 (pp38), MDV072 (LORF11), and MDV071 (LORF10), all of which have moderate to high peptide coverage ( Fig 3 ). This protein has only three predicted tryptic peptides 6 aa, from 27 to 58 aa long,...”
• Latest Insights into Unique Open Reading Frames Encoded by Unique Long (UL) and Short (US) Regions of Marek's Disease Virus
  Liao, Viruses 2021
  • “...MDV069 121,289120,480 (269) LORF9 119,794118,985 (269) MDV069 122,003121,194 (269) LORF9 120,665119,856 (269) MDV069 121,664120,855 (269) MDV071 122,897122,313 (194) LORF10 121,399120,818 (193) MDV071 123,611123,027 (194) LORF10 122,273121,689 (194) MDV071 123,272122,688 (194) MDV072 126,241123,530 (903) LORF11 124,742122,031 (903) MDV072 126,955124,244 (903) LORF11 125,617122,906 (903) MDV072 126,616123,905 (903) LORF12...”
• Deletion of LORF9 but not LORF10 attenuates Marek's disease virus pathogenesis
  Liao, Veterinary microbiology 2020 (PubMed)
  • “...been fully investigated. Among them, LORF9 (MDV069) and LORF10 (MDV071) are locate at the right terminus of the MDV genome unique long region (UL). To...”
  • “...(A ) The genomic location of LORF9 (MDV069) and LORF10 (MDV071). MDV genome consists of a unique lone (UL ) region flanked by terminal repeat long (TRL ) and...”
• Genetic characterization of a Marek's disease virus strain isolated in Japan
  Murata, Virology journal 2020
  • “...E 399 I V I V V V V V V V V V V MDV071 LORF10 (VZV ORF2) 34 L W W W L L L L L W L W L MDV073 R-LORF14a (pp38) 109 G E E E E G G G G...”
• Transcripts of antibacterial peptides in chicken erythrocytes infected with Marek's disease virus
  Niu, BMC veterinary research 2018
  • “...Uncharacterized gene 69 protein protein LORF4 MDV070 501 1 Tegument protein UL55 nuclear protein UL55 MDV071 585 1 Uncharacterized gene 71 protein myristylated tegument protein CIRC MDV072 2712 5 Uncharacterized gene 72 protein protein LORF5 MDV072.5 873 3 membrane protein UL56 MDV088 540 3 Transcriptional regulator...”
• Sequence determination of a mildly virulent strain (CU-2) of Gallid herpesvirus type 2 using 454 pyrosequencing
  Spatz, Virus genes 2008 (PubMed)
  • “...166 100% (166/166) 100% (166/166) 99% (165/166) 100% (166/166) MDV071 LORF 10 194 194 194 194 194 100% (194/194) 99% (193/194) 99% (193/194) 99% (193/194)...”
  • “...R dUTPase MDV066 99 T T A A A DNA helicase-primase-associated protein MDV071 MDV071.4 34 58 L N L N W H W H W H VZV ORF 2 homologue Hypothetical MDV073 109 G G...”
• The genome of a very virulent Marek's disease virus
  Tulman, Journal of virology 2000
  • “...MDV064 MDV065 MDV066 MDV067 MDV068 MDV069 MDV070 MDV071 MDV072 MDV073 MDV074 MDV075a 151396-151001 (132) 151988-152248 (87) 153443-153979 (179) 154149-154685...”

P28988 Gene 3 protein from Equine herpesvirus 1 (strain Ab4p)
Aligns to 22:175 / 257 (59.9%), covers 55.3% of PF07013, 74.8 bits

• Genome of bovine herpesvirus 5
  Delhon, Journal of virology 2003
  • “...48 40 42 a Predicted product and/or functiond P28988 Q05906 AF030027 P28962 X87246 P28892 U38547 X17684 AF030027 P28929 P28937 Z49225 AF030027 P36702 P28957...”

Or search for genetic data about PF07013 in the Fitness Browser