PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07044 (DUF1329)

PF07044.11 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

PA3081 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 84:450 / 455 (80.7%), covers 100.0% of PF07044, 533.6 bits

PA14_13140 hypothetical protein (NCBI) from Pseudomonas aeruginosa UCBPP-PA14
PA3922 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
PaeAG1_01229 DUF1329 domain-containing protein from Pseudomonas aeruginosa
Aligns to 85:450 / 455 (80.4%), covers 100.0% of PF07044, 524.2 bits

DR97_3944 DUF1329 domain-containing protein from Pseudomonas aeruginosa
Aligns to 85:450 / 455 (80.4%), covers 100.0% of PF07044, 521.2 bits

Sama_1589 predicted exporter of cell wall component, with BNR, RND, and DUF1302 proteins (Sama_1590, Sama_1591, Sama_1588) from Shewanella amazonensis SB2B
Aligns to 83:449 / 454 (80.8%), covers 100.0% of PF07044, 517.9 bits

PP0766 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 84:449 / 454 (80.6%), covers 100.0% of PF07044, 517.3 bits

B158DRAFT_0995 predicted exporter of cell wall component, with BNR, RND, and DUF1302 proteins (B158DRAFT_0996, B158DRAFT_0997, B158DRAFT_0994) from Kangiella aquimarina DSM 16071
Aligns to 89:455 / 460 (79.8%), covers 100.0% of PF07044, 511.8 bits

PA3421 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 84:451 / 456 (80.7%), covers 100.0% of PF07044, 507.2 bits

Psest_1123 predicted exporter of cell wall component, with BNR, RND, and DUF1302 proteins (Psest_1923, Psest_1924, Psest_1122) from Pseudomonas stutzeri RCH2
Aligns to 82:448 / 453 (81.0%), covers 100.0% of PF07044, 500.6 bits

PA0383 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 81:444 / 448 (81.2%), covers 99.7% of PF07044, 460.1 bits

ebA1932 DUF1329 domain-containing protein from Aromatoleum aromaticum EbN1
ebA1932 hypothetical protein (NCBI) from Azoarcus sp. EbN1
Aligns to 84:449 / 454 (80.6%), covers 99.5% of PF07044, 423.3 bits

DBX28_14760 DUF1329 domain-containing protein from Pseudomonas aeruginosa
Aligns to 97:469 / 474 (78.7%), covers 100.0% of PF07044, 399.1 bits

PP_2810 DUF1329 domain-containing protein from Pseudomonas putida KT2440
PP2810 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 96:468 / 473 (78.9%), covers 99.7% of PF07044, 393.2 bits

DelCs14_1757 DUF1329 domain-containing protein from Delftia sp. Cs1-4
Aligns to 84:448 / 453 (80.6%), covers 99.7% of PF07044, 382.4 bits

AzCIB_4527 DUF1329 domain-containing protein from Azoarcus sp. CIB
Aligns to 52:434 / 437 (87.6%), covers 100.0% of PF07044, 261.6 bits

PG1179 conserved hypothetical protein (NCBI) from Porphyromonas gingivalis W83
2 alignments in 2:259 / 263 (98.1%), covering up to 33.5% of PF07044, 68.2 bits

TDE2009 conserved hypothetical protein (NCBI) from Treponema denticola ATCC 35405
2 alignments in 11:256 / 261 (94.3%), covering up to 42.0% of PF07044, 61.4 bits

LEN_2603 outer membrane lipoprotein-sorting protein from Lysobacter enzymogenes
Aligns to 30:176 / 304 (48.4%), covers 31.9% of PF07044, 49.5 bits

TOL_3187 outer membrane lipoprotein-sorting protein from Thalassolituus oleivorans MIL-1
Aligns to 826:956 / 1064 (12.3%), covers 24.7% of PF07044, 36.7 bits

Or search for genetic data about PF07044 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory