Family Search for PF07119 (DUF1375)
PF07119 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
PP0549 lipoprotein, putative from Pseudomonas putida KT2440
Aligns to 31:81 / 95 (53.7%), covers 100.0% of PF07119, 70.0 bits
PA3399 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 48:100 / 113 (46.9%), covers 98.0% of PF07119, 67.3 bits
PSPTO_0731 lipoprotein, putative from Pseudomonas syringae pv. tomato str. DC3000
Aligns to 34:84 / 98 (52.0%), covers 100.0% of PF07119, 61.7 bits
VT47_13300 YceK/YidQ family lipoprotein from Pseudomonas syringae pv. syringae
Aligns to 59:110 / 125 (41.6%), covers 100.0% of PF07119, 49.5 bits
YPO4086 putative lipoprotein from Yersinia pestis CO92
Aligns to 32:76 / 112 (40.2%), covers 94.1% of PF07119, 46.1 bits
PFLU0474 hypothetical protein from Pseudomonas fluorescens SBW25
Aligns to 54:112 / 125 (47.2%), covers 100.0% of PF07119, 40.5 bits
LIMLP_04235 YceK/YidQ family lipoprotein from Leptospira interrogans serovar Manilae
Aligns to 34:84 / 514 (9.9%), covers 94.1% of PF07119, 38.9 bits
LIC12649 hypothetical protein from Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Aligns to 34:84 / 514 (9.9%), covers 94.1% of PF07119, 38.4 bits
Pfl01_2488 hypothetical protein from Pseudomonas fluorescens Pf0-1
Aligns to 44:95 / 128 (40.6%), covers 94.1% of PF07119, 38.3 bits
EcfI / b3688 DUF1375 domain-containing putative lipoprotein YidQ from Escherichia coli K-12 substr. MG1655 (see 2 papers)
P0ADM4 Uncharacterized protein YidQ from Escherichia coli (strain K12)
b3688 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 33:77 / 110 (40.9%), covers 92.2% of PF07119, 35.9 bits
- Comparative Analysis of Outer Membrane Vesicle Isolation Methods With an Escherichia coli tolA Mutant Reveals a Hypervesiculating Phenotype With Outer-Inner Membrane Vesicle Content
Reimer, Frontiers in microbiology 2021 - “...0.017 9.5 Increased in tolA P76177 ydgH Protein YdgH tolA <0.00010 INF Increased in tolA P0ADM4 yidQ Uncharacterized protein YidQ tolA 0.0091 INF Increased in tolA P0AF70 yjeI Uncharacterized protein YjeI tolA 0.00013 29 Increased in tolA AC, accession number; ID, identification number; INF, infinity value...”
- The two-component system histidine kinase EnvZ contributes to Avian pathogenic Escherichia coli pathogenicity by regulating biofilm formation and stress responses
Fu, Poultry science 2023 - “...protein 3b (a), protease VII 2.16 b0112 aroP Aromatic amino acid transport protein AroP 1.96 b3688 yidQ Outer membrane protein 1.80 FeS cluster b4291 fecA Iron complex outer membrane receptor protein, putative iron compound receptor 7.37 b1451 yncD Iron complex outer membrane receptor protein 3.24 b1684...”
- Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655
Brokx, Journal of bacteriology 2004 - “...yidQ yidX yjeI b0196 b0557 b0867 b0909 b1193 b1379 b1585 b2617 b2936 b3688 b3696 b4144 220.45 P 98.2 P 48.35 P 15.1 P 106.5 P 35.1 P 25 P 199.45 P 47.3 P 86.85...”
- “...(b1379), ynfC (b1585), smpA (b2617), yggG (b2936), yidQ (b3688), yidX (b3696), and yjeI (b4144)--are included in the microarray results, but RT-PCR data were...”
c4608 hypothetical protein from Escherichia coli CFT073
Aligns to 33:77 / 110 (40.9%), covers 92.2% of PF07119, 35.9 bits
c1316 Hypothetical protein yceK precursor from Escherichia coli CFT073
Aligns to 31:69 / 75 (52.0%), covers 51.0% of PF07119, 33.0 bits
YceK / b1050 DUF1375 domain-containing lipoprotein YceK from Escherichia coli K-12 substr. MG1655 (see 5 papers)
ECs1428 hypothetical protein from Escherichia coli O157:H7 str. Sakai
b1050 predicted lipoprotein from Escherichia coli str. K-12 substr. MG1655
Aligns to 31:69 / 75 (52.0%), covers 51.0% of PF07119, 33.0 bits
- Gene expression induced in Escherichia coli O157:H7 upon exposure to model apple juice
Bergholz, Applied and environmental microbiology 2009 - “...yjiA 1.03 1.03 2.98 0.89 Cell envelope ECs0100 ECs1428 ECs2001 ECs2306 ECs2348 ECs2515 ECs2690 ECs2859 ECs2914 ECs3151 ECs3669 ECs3860 ECs4321 ECs4493 ECs4666...”
- YcfR (BhsA) influences Escherichia coli biofilm formation through stress response and surface hydrophobicity
Zhang, Journal of bacteriology 2007 - “...yceK yjbJ yjdN ygaM ymgE b0806 b0456 b1050 b4045 b4107 b2672 b1195 Hypothetical protein Hypothetical protein Hypothetical protein Highly abundant nonessential...”
- Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity
Weber, Journal of bacteriology 2005 - “...b0389 b0419 b0581 b0643 b0707 b0753 b0767 b0865 b1003 b1050 b1188 b1164 b1258 b1259 b1341 b1547 b1614 b1783 b1784 b1847 b1999 b2080 b2086 b2602 b2660 b2672...”
- Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655
Brokx, Journal of bacteriology 2004 - “...b0453 b0463 b0498 b0589 b0633 b0641 b0735 b0741 b0772 b0830 b1050 b1063 b1079 b1104 b1105 b1209 b1283 b1382 b1431 b1491 b1510 49.65 P 569.75 P 211 P 1,508.05 P...”
- 47th Annual Meeting March 1-5, 2003 Henry B. Gonzalez Convention Center, San Antonio, Texas : Wednesday Posters, Part 1
, Biophysical journal 2003 - Combined, functional genomic-biochemical approach to intermediary metabolism: interaction of acivicin, a glutamine amidotransferase inhibitor, with Escherichia coli K-12
Smulski, Journal of bacteriology 2001 - “...b0800 b0806 b0836 b0865 b0897 b0964 b0966 b1003 b1045 b1050 b1060 b1103 b1104 b1105 b1107 b1108 b1111 b1112 b1128 b1145 b1168 b1178 b1195 b1205 b1256 b1257...”
- 45th Annual Meeting February 17-21, 2001 Boston, Massachusetts : February 19, 2001 Monday Posters, Part 3
, Biophysical journal 2001
KPN_04092 hypothetical protein from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Aligns to 9:53 / 86 (52.3%), covers 92.2% of PF07119, 30.9 bits
HI0650 H. influenzae predicted coding region HI0650 from Haemophilus influenzae Rd KW20
P44028 Uncharacterized protein HI_0650 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Aligns to 30:67 / 70 (54.3%), covers 43.1% of PF07119, 28.3 bits
Or search for genetic data about PF07119 in the Fitness Browser
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory