Family Search for PF07151 (DUF1391)
PF07151 hits 6 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
YdaF / b4527 Rac prophage; DUF1391 domain-containing protein YdaF from Escherichia coli K-12 substr. MG1655
ECs1939 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 2:49 / 51 (94.1%), covers 100.0% of PF07151, 136.9 bits
- Genome evolution in major Escherichia coli O157:H7 lineages
Zhang, BMC genomics 2007 - “...exclusion protein; sieB 100% 0% 0% Sp10 ECs1938 4 hypothetical protein 87% 0% 0% Sp10 ECs1939 (Z2403) hypothetical protein, ydfA 100% 0% 0% S-loop#91 (in Sp10) ECs1941 (Z2400) putative transcriptional regulator 100% 0% 0% S-loop#91 (in Sp10) ECs1942 (Z2399) regulatory protein 100% 0% 0% S-loop#92 (in...”
STY2067 conserved hypothetical protein from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Aligns to 2:49 / 51 (94.1%), covers 95.8% of PF07151, 121.2 bits
UTI89_C1465 hypothetical protein YdfA from Escherichia coli UTI89
Aligns to 29:76 / 78 (61.5%), covers 93.8% of PF07151, 115.4 bits
- High-throughput sequencing of sorted expression libraries reveals inhibitors of bacterial cell division
Mediati, BMC genomics 2018 - “...10,266.0 UTI89_C1460 S UTI89_C1461 dicB D UTI89_C1462 dicF RD UTI89_C1463 ydfC S UTI89_C1464 ydfB S UTI89_C1465 ydfA S UTI89_C1466 dicA KT UTI89_C1467 dicC R 1,961,2911,963,326 UTI89_C2055 zwf G 2036 19.0 1044.3 2,011,0102,012,850 UTI89_C2102 (yecI/ftnB) P 1841 6.7 159.7 UTI89_C2103 yecJ S UTI89_C2104 S UTI89_C2105 yecR SR...”
Z1769 unknown protein encoded by prophage CP-933N from Escherichia coli O157:H7 EDL933
Aligns to 28:75 / 76 (63.2%), covers 91.7% of PF07151, 114.4 bits
- Comparative genomics analysis and characterization of Shiga toxin-producing Escherichia coli O157:H7 strains reveal virulence genes, resistance genes, prophages and plasmids
Naidoo, BMC genomics 2023 - “...Z866, Z869, Z885, Z887, Z892, Z903, Z910, Z1486, Z1504, Z1615, Z1626, Z1723, Z1766, Z1767, Z1768, Z1769, Z1811, Z1812, Z1813, Z1814, Z1815, Z1816, Z1825, Z1826, Z1830, Z1831, Z1832, Z1833, Z1834, Z1835, Z1836. The number or virulence genes present ranged from 15 to 46. The number or pathogen...”
- “...and 6 incomplete) and percentage GC of 50.50%. Fourteen strains (Z852, Z903, Z1626, Z1766, Z1768, Z1769, Z1812, Z1815, Z1816, Z1825, Z1830, Z1831, Z1832 and Z1833) had 21 prophages (13 intact, 5 questionable and 3 incomplete) and percentage GC of 50.53%. The results for the PHASTER analysis...”
YdfA / b1571 Qin prophage; DUF1391 domain-containing protein YdfA from Escherichia coli K-12 substr. MG1655 (see paper)
b1571 Qin prophage; predicted protein from Escherichia coli str. K-12 substr. MG1655
Z1331 unknown protein encoded by cryptic prophage CP-933M from Escherichia coli O157:H7 EDL933
Aligns to 2:49 / 51 (94.1%), covers 93.8% of PF07151, 114.2 bits
- 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
, Haematologica 2013 - luxS-dependent gene regulation in Escherichia coli K-12 revealed by genomic expression profiling
Wang, Journal of bacteriology 2005 - “...b0790 b1720 b1010 b2797 b2993 b0042 b1001 b2549 b1311 b3141 b1012 b1571 lsrG lsrD lsrA lsrB metE lsrF lsrK yneE yfaE tam yjhR lsrR lsrC gpmB argX ileT arpA gatR...”
- The Mobilizable Plasmid P3 of Salmonella enterica Serovar Typhimurium SL1344 Depends on the P2 Plasmid for Conjugative Transfer into a Broad Range of Bacteria In Vitro and In Vivo
Gaissmaier, Journal of bacteriology 2022 - “...of feces and cecal content for the next 3days. Transconjugants were detected in E. coli Z1331, H. alvei , C. braakii , and Y. enterocolitica ( Fig. 2a , b , c , and e , respectively). No transconjugants were detected in K. michiganensis ( Fig....”
- “...strain S . Typhimurium SL1344 on day 1. The tested recipients are (a) E. coli Z1331 WITS1 Amp r lac + ( n =6) (b) H. alvei /pM965 (Amp r )/pACYC184 (Cm r ) ( n =5), (d) K. michiganensis (Amp r lac + ) (...”
- The mobilizable plasmid P3 of Salmonella enterica serovar Typhimurium SL1344 depends on the P2 plasmid for conjugative transfer into a broad range of bacteria in vitro and in vivo
Gaissmaier, 2022 - Novel two-component transmembrane transcription control: regulation of iron dicitrate transport in Escherichia coli K-12
Van, Journal of bacteriology 1990 - “...chromosomal BglII frag- Strain or plasmid Strains AB2847 WM1576 Z1331 Z1332 Z1333 Z1335 Z1337 Z1778 VH26 VH27 VH28 VH32 VH29 VH33 VH53 VH55 Z1418 VH20 VH21 VH63...”
- “...dl(Ap lac) As AB2847 but lac::TnJOfecI::Mu dl(Ap lac) As Z1331 but fepA Z1333(pBV25) Z1333(pMc2-54) Source or reference 39 41 32 32 32 32 32 This This This...”
- Genetics of the iron dicitrate transport system of Escherichia coli
Pressler, Journal of bacteriology 1988 - “...E. coli K-12 H1443 Z1367 H799 Z1418 Z1314 Z1640 Z1331 Z1332 Z1333 Z1335 ZI337 Z1334 Z1336 Z1338 Z1379 Z1381 CR63 DS410 Z1813 Z1814 Z1815 Z1816 Z1817 Genotype'...”
- “...(lane 2), E. coli K-12 AB2847 (lane 3), and Z1331 (lane 4), digested with PstI, and separated on agarose gels. (C) 35S-labeled 0.6-kb BamHI-PstI fragment of...”
c1409 Hypothetical protein ydfA from Escherichia coli CFT073
Aligns to 29:76 / 78 (61.5%), covers 93.8% of PF07151, 104.4 bits
Or search for genetic data about PF07151 in the Fitness Browser
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory