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Family Search for PF07233 (DUF1425)

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Running HMMer for PF07233

PF07233 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

VP0966 conserved hypothetical protein from Vibrio parahaemolyticus RIMD 2210633
Aligns to 31:126 / 130 (73.8%), covers 100.0% of PF07233, 104.0 bits

Shew_1734 hypothetical protein from Shewanella loihica PV-4
Aligns to 30:125 / 129 (74.4%), covers 99.0% of PF07233, 96.5 bits

VV93_v1c20800 YcfL family protein from Vibrio vulnificus
Aligns to 31:126 / 129 (74.4%), covers 99.0% of PF07233, 95.1 bits

SPA1645 putative lipoprotein from Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Aligns to 30:124 / 124 (76.6%), covers 99.0% of PF07233, 94.3 bits

SEET0819_12675 YcfL family protein from Salmonella enterica subsp. enterica serovar Tennessee str.
NP_460176 putative outer membrane lipoprotein from Salmonella typhimurium LT2
Aligns to 30:124 / 124 (76.6%), covers 99.0% of PF07233, 94.1 bits

S1188 hypothetical protein from Shigella flexneri 2a str. 2457T
Aligns to 31:125 / 125 (76.0%), covers 99.0% of PF07233, 91.0 bits

YPTB2452 putative lipoprotein from Yersinia pseudotuberculosis IP 32953
YPO1612 putative lipoprotein from Yersinia pestis CO92
Aligns to 35:129 / 129 (73.6%), covers 99.0% of PF07233, 91.0 bits

YcfL / b1104 DUF1425 domain-containing protein YcfL from Escherichia coli K-12 substr. MG1655 (see paper)
b1104 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 31:125 / 125 (76.0%), covers 99.0% of PF07233, 90.6 bits

EAM_1468 lipoprotein from Erwinia amylovora ATCC 49946
Aligns to 28:122 / 122 (77.9%), covers 97.9% of PF07233, 86.1 bits

NJ56_16480 DUF1425 domain-containing protein from Yersinia ruckeri
Aligns to 35:129 / 129 (73.6%), covers 99.0% of PF07233, 77.1 bits

YP_002343550 lipoprotein from Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Cj0090 putative lipoprotein from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 26:120 / 122 (77.9%), covers 99.0% of PF07233, 66.3 bits

CJJ81176_0125 lipoprotein, putative from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 26:120 / 122 (77.9%), covers 99.0% of PF07233, 65.5 bits

APJL_0126 predicted periplasmic lipoprotein from Actinobacillus pleuropneumoniae serovar 3 str. JL03
APL_0125 hypothetical protein from Actinobacillus pleuropneumoniae L20
Aligns to 31:122 / 124 (74.2%), covers 72.9% of PF07233, 41.6 bits

NTHI1133 predicted periplasmic lipoprotein from Haemophilus influenzae 86-028NP
Aligns to 35:116 / 116 (70.7%), covers 71.9% of PF07233, 34.8 bits

HI0960 H. influenzae predicted coding region HI0960 from Haemophilus influenzae Rd KW20
P44084 Uncharacterized protein HI_0960 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Aligns to 35:116 / 116 (70.7%), covers 71.9% of PF07233, 33.8 bits

Or search for genetic data about PF07233 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory