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Family Search for PF07233 (DUF1425)

PF07233.12 hits 13 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

VP0966 conserved hypothetical protein (NCBI ptt file) from Vibrio parahaemolyticus RIMD 2210633
Aligns to 34:125 / 130 (70.8%), covers 98.9% of PF07233, 102.2 bits

Shew_1734 hypothetical protein (RefSeq) from Shewanella loihica PV-4
Aligns to 33:124 / 129 (71.3%), covers 98.9% of PF07233, 97.4 bits

SPA1645 putative lipoprotein (NCBI) from Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
Aligns to 33:123 / 124 (73.4%), covers 100.0% of PF07233, 92.3 bits

NP_460176 putative outer membrane lipoprotein (NCBI ptt file) from Salmonella typhimurium LT2
SEET0819_12675 YcfL family protein from Salmonella enterica subsp. enterica serovar Tennessee str.
Aligns to 33:123 / 124 (73.4%), covers 100.0% of PF07233, 91.9 bits

c1377 Hypothetical protein ycfL (NCBI ptt file) from Escherichia coli CFT073
Aligns to 34:124 / 125 (72.8%), covers 100.0% of PF07233, 90.9 bits

YcfL / b1104 DUF1425 domain-containing protein YcfL from Escherichia coli K-12 substr. MG1655 (see paper)
b1104 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 34:124 / 125 (72.8%), covers 100.0% of PF07233, 89.8 bits

YPO1612 putative lipoprotein (NCBI ptt file) from Yersinia pestis CO92
YPTB2452 putative lipoprotein (NCBI) from Yersinia pseudotuberculosis IP 32953
Aligns to 38:128 / 129 (70.5%), covers 98.9% of PF07233, 88.3 bits

NJ56_16480 DUF1425 domain-containing protein from Yersinia ruckeri
Aligns to 38:128 / 129 (70.5%), covers 98.9% of PF07233, 82.9 bits

APL_0125 hypothetical protein (NCBI) from Actinobacillus pleuropneumoniae L20
APJL_0126 predicted periplasmic lipoprotein (RefSeq) from Actinobacillus pleuropneumoniae serovar 3 str. JL03
Aligns to 32:121 / 124 (72.6%), covers 82.6% of PF07233, 42.7 bits

NTHI1133 predicted periplasmic lipoprotein (RefSeq) from Haemophilus influenzae 86-028NP
Aligns to 34:116 / 116 (71.6%), covers 76.1% of PF07233, 32.2 bits

Cj0090 putative lipoprotein (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
YP_002343550 lipoprotein from Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Aligns to 29:119 / 122 (74.6%), covers 78.3% of PF07233, 31.7 bits

CJJ81176_0125 lipoprotein, putative (NCBI) from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 29:119 / 122 (74.6%), covers 78.3% of PF07233, 31.6 bits

P44084 Uncharacterized protein HI_0960 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
HI0960 H. influenzae predicted coding region HI0960 (NCBI ptt file) from Haemophilus influenzae Rd KW20
Aligns to 34:116 / 116 (71.6%), covers 76.1% of PF07233, 31.5 bits

Or search for genetic data about PF07233 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory