PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07242 (DUF1430)

PF07242 hits 16 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SP_1988 immunity protein, putative from Streptococcus pneumoniae TIGR4
Aligns to 577:676 / 677 (14.8%), covers 100.0% of PF07242, 97.3 bits

spr1802 Conserved hypothetical protein from Streptococcus pneumoniae R6
Aligns to 580:679 / 680 (14.7%), covers 100.0% of PF07242, 97.3 bits

DQM66_RS09500 bacteriocin-associated integral membrane family protein from Streptococcus pneumoniae
Aligns to 576:675 / 676 (14.8%), covers 100.0% of PF07242, 97.3 bits

SP_0686 hypothetical protein from Streptococcus pneumoniae TIGR4
Aligns to 573:672 / 673 (14.9%), covers 100.0% of PF07242, 96.3 bits

spr0601 Conserved hypothetical protein from Streptococcus pneumoniae R6
Aligns to 573:672 / 673 (14.9%), covers 100.0% of PF07242, 96.3 bits

SPD_1754 hypothetical protein from Streptococcus pneumoniae D39
spr1772 Hypothetical protein, truncation from Streptococcus pneumoniae R6
Aligns to 155:254 / 255 (39.2%), covers 100.0% of PF07242, 96.0 bits

lmo2775 hypothetical membrane protein from Listeria monocytogenes EGD-e
Aligns to 619:718 / 722 (13.9%), covers 100.0% of PF07242, 85.8 bits

TC 9.A.7.1.1 / Q9L651 Class IIc bacteriocin, Lactococcin 972 immunity protein from Lactococcus lactis (subsp. lactis) (Streptococcus lactis) (see 2 papers)
Aligns to 549:647 / 648 (15.3%), covers 99.0% of PF07242, 78.6 bits

SSU05_0247 hypothetical protein from Streptococcus suis 05ZYH33
Aligns to 493:592 / 593 (16.9%), covers 100.0% of PF07242, 76.1 bits

SSU0228 membrane protein from Streptococcus suis P1/7
Aligns to 561:660 / 661 (15.1%), covers 100.0% of PF07242, 75.9 bits

SAR0695 putative membrane protein from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 545:643 / 644 (15.4%), covers 100.0% of PF07242, 70.3 bits

SA0886 hypothetical protein from Staphylococcus aureus subsp. aureus N315
Aligns to 555:653 / 654 (15.1%), covers 100.0% of PF07242, 48.5 bits

BJL64_05095 bacteriocin-associated integral membrane family protein from Staphylococcus aureus
Aligns to 555:653 / 654 (15.1%), covers 100.0% of PF07242, 48.4 bits

SACOL1038 membrane protein from Staphylococcus aureus subsp. aureus COL
SAOUHSC_00968 hypothetical protein from Staphylococcus aureus subsp. aureus NCTC 8325
SAUSA300_0934 membrane protein from Staphylococcus aureus subsp. aureus USA300_FPR3757
NWMN_0901 hypothetical protein from Staphylococcus aureus subsp. aureus str. Newman
Aligns to 555:653 / 654 (15.1%), covers 100.0% of PF07242, 47.1 bits

SAR1002 putative membrane protein from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 555:653 / 654 (15.1%), covers 100.0% of PF07242, 46.5 bits

SE1039_RS11385 DUF1430 domain-containing protein from Staphylococcus equorum
Aligns to 542:647 / 650 (16.3%), covers 93.0% of PF07242, 40.4 bits

Or search for genetic data about PF07242 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory