PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07274 (DUF1440)

PF07274.12 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SAR0182 putative membrane protein (NCBI) from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 18:152 / 164 (82.3%), covers 100.0% of PF07274, 199.4 bits

SAOUHSC_00146 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus NCTC 8325
Aligns to 13:147 / 159 (84.9%), covers 100.0% of PF07274, 199.0 bits

SAUSA300_0183 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus USA300_FPR3757
NWMN_0125 hypothetical protein (RefSeq) from Staphylococcus aureus subsp. aureus str. Newman
Aligns to 18:152 / 164 (82.3%), covers 100.0% of PF07274, 198.8 bits

SA0175 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
SAAV_0149 hypothetical protein (RefSeq) from Staphylococcus aureus subsp. aureus ED98
Aligns to 18:152 / 164 (82.3%), covers 100.0% of PF07274, 196.9 bits

LLKF_1853 hypothetical protein (RefSeq) from Lactococcus lactis subsp. lactis KF147
Aligns to 27:162 / 179 (76.0%), covers 99.3% of PF07274, 189.7 bits

c0399 Hypothetical protein yagU (NCBI ptt file) from Escherichia coli CFT073
Aligns to 26:181 / 204 (76.5%), covers 100.0% of PF07274, 184.4 bits

YagU / b0287 inner membrane protein that contributes to acid resistance from Escherichia coli K-12 substr. MG1655 (see 3 papers)
YAGU_ECOLI / P0AAA1 Inner membrane protein YagU from Escherichia coli (strain K12) (see paper)
E2348C_0243 YagU family protein from Escherichia coli O127:H6 str. E2348/69
b0287 conserved inner membrane protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Z0353 orf, hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
ECs0317 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 26:181 / 204 (76.5%), covers 100.0% of PF07274, 183.8 bits

ECA0449 YagU family protein from Pectobacterium atrosepticum SCRI1043
ECA0449 putative membrane protein (NCBI) from Erwinia carotovora subsp. atroseptica SCRI1043
Aligns to 26:181 / 204 (76.5%), covers 100.0% of PF07274, 176.0 bits

Cj0014c putative integral membrane protein (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
Aligns to 21:159 / 174 (79.9%), covers 100.0% of PF07274, 172.9 bits

APL_1690 inner membrane protein (NCBI) from Actinobacillus pleuropneumoniae L20
Aligns to 26:189 / 213 (77.0%), covers 100.0% of PF07274, 170.9 bits

PSPPH_0762 hypothetical protein (NCBI) from Pseudomonas syringae pv. phaseolicola 1448A
Aligns to 18:148 / 162 (80.9%), covers 99.3% of PF07274, 166.6 bits

PSPTO_0851 conserved hypothetical protein (NCBI ptt file) from Pseudomonas syringae pv. tomato str. DC3000
Aligns to 18:148 / 162 (80.9%), covers 99.3% of PF07274, 166.0 bits

PMI0488 phage membrane protein (RefSeq) from Proteus mirabilis HI4320
Aligns to 27:157 / 173 (75.7%), covers 99.3% of PF07274, 150.5 bits

CJJ81176_0040 inner membrane protein YagU (NCBI) from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 1:34 / 49 (69.4%), covers 25.2% of PF07274, 41.0 bits

CJJ81176_0041 membrane protein, putative, degenerate (NCBI) from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 21:74 / 93 (58.1%), covers 28.9% of PF07274, 38.0 bits

Or search for genetic data about PF07274 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory