PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07286 (DUF1445)

PF07286.12 hits 17 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

A1S_1268 hypothetical protein (RefSeq) from Acinetobacter baumannii ATCC 17978
Aligns to 86:228 / 236 (60.6%), covers 100.0% of PF07286, 229.7 bits

P42966 Putative hydro-lyase YcsI from Bacillus subtilis (strain 168)
Aligns to 106:248 / 257 (55.6%), covers 100.0% of PF07286, 228.1 bits

Atu3911 hypothetical protein (RefSeq) from Agrobacterium tumefaciens str. C58 (Cereon)
Aligns to 119:261 / 269 (53.2%), covers 100.0% of PF07286, 222.7 bits

blr2921 blr2921 (NCBI ptt file) from Bradyrhizobium japonicum USDA 110
Aligns to 120:262 / 271 (52.8%), covers 100.0% of PF07286, 221.1 bits

SCA_2211 putative hydro-lyase from Staphylococcus carnosus subsp. carnosus TM300
Sca_2211 hypothetical protein (RefSeq) from Staphylococcus carnosus subsp. carnosus TM300
Aligns to 112:254 / 262 (54.6%), covers 100.0% of PF07286, 215.5 bits

AZC_4080 hypothetical protein (RefSeq) from Azorhizobium caulinodans ORS 571
Aligns to 121:263 / 272 (52.6%), covers 100.0% of PF07286, 215.3 bits

BCAM0576 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 106:248 / 257 (55.6%), covers 100.0% of PF07286, 211.8 bits

Dshi_3152 protein of unknown function DUF1445 (RefSeq) from Dinoroseobacter shibae DFL 12
Aligns to 128:270 / 300 (47.7%), covers 100.0% of PF07286, 209.0 bits

AFUA_5G01690 DUF1445 domain protein from Aspergillus fumigatus Af293
Aligns to 132:280 / 301 (49.5%), covers 100.0% of PF07286, 208.1 bits

SAR11_0660 hypothetical protein (NCBI) from Candidatus Pelagibacter ubique HTCC1062
Aligns to 109:252 / 261 (55.2%), covers 99.3% of PF07286, 203.4 bits

CNE05290 hypothetical protein (RefSeq) from Cryptococcus neoformans var. neoformans JEC21
Aligns to 122:268 / 276 (53.3%), covers 100.0% of PF07286, 202.8 bits

PA2116 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 117:259 / 265 (54.0%), covers 100.0% of PF07286, 198.9 bits

Q09674 Putative hydro-lyase C5H10.01 from Schizosaccharomyces pombe (strain 972 / ATCC 24843)
SPAC5H10.01 DUF1445 family protein (RefSeq) from Schizosaccharomyces pombe
Aligns to 151:296 / 301 (48.5%), covers 100.0% of PF07286, 189.9 bits

GLUCM_MOUSE / Q8BH86 D-glutamate cyclase, mitochondrial; EC 4.2.1.48 from Mus musculus (Mouse) (see paper)
Q8BH86 D-glutamate cyclase (EC 4.2.1.48) from Mus musculus (see 2 papers)
Aligns to 115:257 / 617 (23.2%), covers 98.6% of PF07286, 168.1 bits

NP_001347946 D-glutamate cyclase, mitochondrial isoform 1 from Mus musculus
Aligns to 145:287 / 647 (22.1%), covers 98.6% of PF07286, 168.0 bits

NP_001273399 D-glutamate cyclase, mitochondrial isoform b precursor from Homo sapiens
Aligns to 118:260 / 621 (23.0%), covers 100.0% of PF07286, 163.6 bits

Q7Z3D6 D-glutamate cyclase, mitochondrial from Homo sapiens
Aligns to 118:255 / 616 (22.4%), covers 100.0% of PF07286, 146.5 bits

Or search for genetic data about PF07286 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory