PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07295 (DUF1451)

PF07295.11 hits 7 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

y1185 putative alpha helical protein (NCBI ptt file) from Yersinia pestis KIM
Aligns to 19:163 / 166 (87.3%), covers 99.3% of PF07295, 184.1 bits

YbeL / b0643 DUF1451 domain-containing protein YbeL from Escherichia coli K-12 substr. MG1655 (see 4 papers)
b0643 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
NP_415176 DUF1451 domain-containing protein YbeL from Escherichia coli str. K-12 substr. MG1655
ECs0681 putative alpha helical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 13:157 / 160 (90.6%), covers 99.3% of PF07295, 179.9 bits

STM0653 putative cytoplasmic protein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 13:154 / 157 (90.4%), covers 99.3% of PF07295, 179.8 bits

VC0957 conserved hypothetical protein (NCBI ptt file) from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 13:153 / 156 (90.4%), covers 99.3% of PF07295, 167.2 bits

SO_1175 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 3:145 / 148 (96.6%), covers 98.6% of PF07295, 166.5 bits

BAU10_02660 zinc ribbon-containing protein from Vibrio alginolyticus
Aligns to 13:153 / 156 (90.4%), covers 98.6% of PF07295, 162.4 bits

HMPREF0389_RS04690 rubredoxin-like protein from Filifactor alocis ATCC 35896
Aligns to 1:45 / 46 (97.8%), covers 27.2% of PF07295, 33.6 bits

Or search for genetic data about PF07295 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory