PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07369 (DUF1488)

PF07369.11 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YrdB / b3280 DUF1488 domain-containing protein YrdB from Escherichia coli K-12 substr. MG1655 (see paper)
b3280 hypothetical protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 5:84 / 85 (94.1%), covers 100.0% of PF07369, 106.1 bits

ECs4146 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Aligns to 5:84 / 85 (94.1%), covers 100.0% of PF07369, 101.9 bits

BCAM1480 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 8:87 / 96 (83.3%), covers 98.8% of PF07369, 99.9 bits

WR30_RS23375 DUF1488 domain-containing protein from Burkholderia contaminans FFH2055
Aligns to 8:87 / 96 (83.3%), covers 98.8% of PF07369, 98.7 bits

SC3336 putative periplasmic protein (NCBI) from Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Aligns to 5:84 / 85 (94.1%), covers 100.0% of PF07369, 97.3 bits

BCAM2209 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 3:82 / 95 (84.2%), covers 97.6% of PF07369, 90.9 bits

BMULJ_05610 hypothetical protein (RefSeq) from Burkholderia multivorans ATCC 17616
Aligns to 3:82 / 91 (87.9%), covers 100.0% of PF07369, 90.7 bits

WR30_RS16580 DUF1488 domain-containing protein from Burkholderia contaminans FFH2055
Aligns to 3:82 / 91 (87.9%), covers 100.0% of PF07369, 90.4 bits

SO0041 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 5:90 / 91 (94.5%), covers 100.0% of PF07369, 87.5 bits

BCAM0277 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 3:82 / 91 (87.9%), covers 98.8% of PF07369, 87.4 bits

Or search for genetic data about PF07369 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory