Family Search for PF07796 (DUF1638)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF07796 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

MM0583 conserved protein from Methanosarcina mazei Goe1
Aligns to 75:251 / 264 (67.0%), covers 97.5% of PF07796, 130.4 bits

• Transcriptional profiling of methyltransferase genes during growth of Methanosarcina mazei on trimethylamine
  Krätzer, Journal of bacteriology 2009
  • “...MM1762 MM1977 MM2882 MM2933 MM3197 MM0011 MM0093 MM0496 MM0583 MM0671 MM0772 MM0869 MM0870 MM0871 MM0872 MM1025 MM1284 MM1304 MM1321 MM1436f MM1438f MM1439...”

PGA1_c13340 Accessory protein for co(II)balamin reduction (DUF1638) (EC:2.1.1.13) from Phaeobacter inhibens BS107
PGA1_c13340 DUF1638 domain-containing protein from Phaeobacter inhibens DSM 17395
Aligns to 72:231 / 241 (66.4%), covers 99.4% of PF07796, 108.3 bits

• mutant phenotype: Apparently required for the reactivation of vitamin B12 (auxotroph)
• Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics
  Price, PLoS genetics 2018
  • “...in B12 reactivation: a protein with ferredoxin and DUF4445 domains (PGA1_c15200) and a DUF1638 protein (PGA1_c13340). As shown in Fig 4B , mutants in these genes are rescued by added methionine. The DUF4445 protein is distantly related to RamA, which uses ATP to drive the reductive...”

RSP_2121 hypothetical protein from Rhodobacter sphaeroides 2.4.1
Aligns to 49:204 / 209 (74.6%), covers 98.1% of PF07796, 98.2 bits

• Convergence of the transcriptional responses to heat shock and singlet oxygen stresses
  Dufour, PLoS genetics 2012
  • “...RSP_1193, RSP_1204, RSP_1238, RSP_1241, RSP_1360, RSP_1406, RSP_1549, RSP_1563, RSP_1573, RSP_1581, RSP_1615, RSP_1671, RSP_1684, RSP_1743, RSP_1852, RSP_2121, RSP_2125, RSP_2214, RSP_2219, RSP_2387, RSP_2638, RSP_2640, RSP_2641, RSP_2739, RSP_2763, RSP_2764, RSP_2816, RSP_2952, RSP_2953, RSP_3067, RSP_3068, RSP_3378, RSP_3426, RSP_3552, RSP_3597, RSP_3598, RSP_3634, RSP_3809, RSP_3810, RSP_4244, RSP_4245, RSP_4248, RSP_4305 RpoHII regulon (99...”

Or search for genetic data about PF07796 in the Fitness Browser