PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07853 (DUF1648)

PF07853 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

ORF1 / CAA68901.1 ORF1 from Streptococcus iniae (see paper)
Aligns to 13:61 / 210 (23.3%), covers 100.0% of PF07853, 74.8 bits

LBYS11_21200 DUF1648 domain-containing protein from Lysinibacillus sp. YS11
Aligns to 23:70 / 164 (29.3%), covers 98.0% of PF07853, 63.0 bits

DET1248 membrane protein, putative from Dehalococcoides ethenogenes 195
Aligns to 13:61 / 221 (22.2%), covers 98.0% of PF07853, 62.3 bits

TK1923 hypothetical protein from Thermococcus kodakaraensis KOD1
Aligns to 130:177 / 264 (18.2%), covers 91.8% of PF07853, 62.2 bits

Rumal_3686 DUF1648 domain-containing protein from Ruminococcus albus 7 = DSM 20455
Aligns to 7:54 / 231 (20.8%), covers 98.0% of PF07853, 57.0 bits

SAR0112 putative membrane protein from Staphylococcus aureus subsp. aureus MRSA252
Aligns to 13:61 / 157 (31.2%), covers 87.8% of PF07853, 49.9 bits

SA0105 hypothetical protein from Staphylococcus aureus subsp. aureus N315
Aligns to 13:61 / 157 (31.2%), covers 87.8% of PF07853, 49.9 bits

KO21_RS13120 SdpI family protein from Listeria monocytogenes
lmo2570 lmo2570 from Listeria monocytogenes EGD-e
Aligns to 10:58 / 204 (24.0%), covers 100.0% of PF07853, 49.6 bits

YBGB_BACSU / O31460 Uncharacterized membrane protein YbgB from Bacillus subtilis (strain 168) (see paper)
Aligns to 12:60 / 91 (53.8%), covers 95.9% of PF07853, 49.6 bits

SDPI_BACSU / O32241 Immunity protein SdpI from Bacillus subtilis (strain 168) (see 4 papers)
TC 9.A.32.1.1 / O32241 SdpC immunity protein, SdpI (6 TMSs) (see 2 papers)
BSU33780 integral inner membrane regulator of autophagy from Bacillus subtilis subsp. subtilis str. 168
Aligns to 9:56 / 207 (23.2%), covers 100.0% of PF07853, 40.9 bits

lmo0910 lmo0910 from Listeria monocytogenes EGD-e
Aligns to 148:197 / 367 (13.6%), covers 100.0% of PF07853, 40.0 bits

DIP1677 Putative membrane protein from Corynebacterium diphtheriae NCTC 13129
Aligns to 28:78 / 235 (21.7%), covers 87.8% of PF07853, 39.2 bits

Or search for genetic data about PF07853 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory