PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07869 (DUF1656)

PF07869.12 hits 17 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BMEII0532 Hypothetical Membrane Associated Protein (NCBI ptt file) from Brucella melitensis 16M
Aligns to 4:59 / 69 (81.2%), covers 100.0% of PF07869, 83.4 bits

RR42_RS03030 required for 4-hydroxybenzoate transport, together with NodT, MFP, and FUSC proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03025) from Cupriavidus basilensis FW507-4G11
Aligns to 4:59 / 69 (81.2%), covers 98.2% of PF07869, 81.9 bits

BCAS0016 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 4:59 / 70 (80.0%), covers 100.0% of PF07869, 76.8 bits

XCC4168 conserved hypothetical protein (NCBI ptt file) from Xanthomonas campestris pv. campestris str. ATCC 33913
Aligns to 7:62 / 72 (77.8%), covers 98.2% of PF07869, 76.0 bits

PS417_00715 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) from Pseudomonas simiae WCS417
Aligns to 4:59 / 69 (81.2%), covers 100.0% of PF07869, 75.2 bits

PfGW456L13_506 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PfGW456L13_504, PfGW456L13_505, PfGW456L13_507) from Pseudomonas fluorescens GW456-L13
Aligns to 4:59 / 69 (81.2%), covers 100.0% of PF07869, 74.6 bits

ZMO1431 hypothetical protein (RefSeq) from Zymomonas mobilis subsp. mobilis ZM4
Aligns to 5:60 / 77 (72.7%), covers 98.2% of PF07869, 74.5 bits

AO356_17240 required for acetate efflux, together with NodT, MFP and FUSC proteins (AO356_17230, AO356_17245, and AO356_17235) from Pseudomonas fluorescens FW300-N2C3
Pf6N2E2_5373 required for cephalothin efflux, together with NodT, MFP and FUSC proteins (Pf6N2E2_5371, Pf6N2E2_5374, Pf6N2E2_5372) from Pseudomonas fluorescens FW300-N2E2
Aligns to 4:59 / 66 (84.8%), covers 100.0% of PF07869, 73.6 bits

AO353_04830 required for acetate efflux, together with NodT, MFP and FUSC proteins (AO353_04840, AO353_04825, and AO353_04835) from Pseudomonas fluorescens FW300-N2E3
Aligns to 4:59 / 66 (84.8%), covers 100.0% of PF07869, 73.3 bits

AaeX / b3242 DUF1656 domain-containing protein AaeX from Escherichia coli K-12 substr. MG1655 (see 2 papers)
AAEX_ECOLI / P46478 Protein AaeX from Escherichia coli (strain K12) (see paper)
b3242 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 6:61 / 67 (83.6%), covers 98.2% of PF07869, 72.1 bits

PP1265 conserved domain protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 4:59 / 66 (84.8%), covers 100.0% of PF07869, 69.5 bits

Pf6N2E2_2878 required for 4-hydroxybenzoate and octanoate transport, together with MFP and FUSC proteins (Pf6N2E2_2877, Pf6N2E2_2879) from Pseudomonas fluorescens FW300-N2E2
Aligns to 5:60 / 68 (82.4%), covers 98.2% of PF07869, 68.2 bits

ECs4115 hypothetical protein (RefSeq) from Escherichia coli O157:H7 str. Sakai
Z4601 hypothetical protein (RefSeq) from Escherichia coli O157:H7 EDL933
Aligns to 6:61 / 67 (83.6%), covers 98.2% of PF07869, 66.9 bits

ACIAD0350 conserved hypothetical protein; putative membrane protein (NCBI) from Acinetobacter sp. ADP1
Aligns to 4:59 / 70 (80.0%), covers 98.2% of PF07869, 56.2 bits

t1311 conserved hypothetical protein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi Ty2
Aligns to 16:70 / 78 (70.5%), covers 92.9% of PF07869, 53.7 bits

YdhI / b1643 DUF1656 domain-containing protein YdhI from Escherichia coli K-12 substr. MG1655 (see paper)
b1643 predicted inner membrane protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Z2658 orf, hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 16:70 / 78 (70.5%), covers 92.9% of PF07869, 52.8 bits

PA1230 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 7:60 / 65 (83.1%), covers 98.2% of PF07869, 43.1 bits

Or search for genetic data about PF07869 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory