PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07933 (DUF1681)

PF07933 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

W8CD89 NECAP-like protein CG9132 from Ceratitis capitata
Aligns to 3:158 / 247 (63.2%), covers 99.4% of PF07933, 212.1 bits

Q6DBU3 LOC553536 protein (Fragment) from Danio rerio
Aligns to 7:164 / 258 (61.2%), covers 100.0% of PF07933, 211.9 bits

NECP2_RAT / Q6P756 Adaptin ear-binding coat-associated protein 2; NECAP-2 from Rattus norvegicus (Rat) (see paper)
Aligns to 6:163 / 263 (60.1%), covers 99.4% of PF07933, 207.3 bits

Q3T093 Adaptin ear-binding coat-associated protein 1 from Bos taurus
Aligns to 7:164 / 275 (57.5%), covers 100.0% of PF07933, 205.5 bits

NECP1_MOUSE / Q9CR95 Adaptin ear-binding coat-associated protein 1; NECAP endocytosis-associated protein 1; NECAP-1 from Mus musculus (Mouse) (see 4 papers)
NP_080543 adaptin ear-binding coat-associated protein 1 from Mus musculus
Aligns to 7:164 / 275 (57.5%), covers 100.0% of PF07933, 205.3 bits

NP_060560 adaptin ear-binding coat-associated protein 2 isoform 1 from Homo sapiens
Q9NVZ3 Adaptin ear-binding coat-associated protein 2 from Homo sapiens
Aligns to 6:163 / 263 (60.1%), covers 99.4% of PF07933, 205.3 bits

XP_038295023 adaptin ear-binding coat-associated protein 1 from Canis lupus familiaris
Aligns to 7:164 / 275 (57.5%), covers 100.0% of PF07933, 205.2 bits

NECP2_MOUSE / Q9D1J1 Adaptin ear-binding coat-associated protein 2; NECAP endocytosis-associated protein 2; NECAP-2 from Mus musculus (Mouse) (see 2 papers)
Aligns to 6:163 / 266 (59.4%), covers 99.4% of PF07933, 205.2 bits

NECP1_HUMAN / Q8NC96 Adaptin ear-binding coat-associated protein 1; NECAP endocytosis-associated protein 1; NECAP-1 from Homo sapiens (Human) (see paper)
NP_056324 adaptin ear-binding coat-associated protein 1 from Homo sapiens
Aligns to 7:164 / 275 (57.5%), covers 99.4% of PF07933, 205.0 bits

NECP1_RAT / P69682 Adaptin ear-binding coat-associated protein 1; NECAP endocytosis-associated protein 1; NECAP-1 from Rattus norvegicus (Rat) (see 2 papers)
NP_001025090 adaptin ear-binding coat-associated protein 1 from Rattus norvegicus
Aligns to 7:164 / 277 (57.0%), covers 100.0% of PF07933, 204.4 bits

AT1G03900 ATNAP4 (Arabidopsis thaliana non-intrinsic ABC protein 4); ATPase, coupled to transmembrane movement of substances / transporter from Arabidopsis thaliana
Aligns to 12:175 / 272 (60.3%), covers 100.0% of PF07933, 199.1 bits

Bm1_42615 Uncharacterized protein from Brugia malayi
Aligns to 5:160 / 213 (73.2%), covers 100.0% of PF07933, 188.1 bits

Q9N489 NECAP PHear domain-containing protein from Caenorhabditis elegans
NP_494398 NECAP PHear domain-containing protein from Caenorhabditis elegans
Aligns to 4:158 / 236 (65.7%), covers 100.0% of PF07933, 187.8 bits

C0NNW9 NECAP PHear domain-containing protein from Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432)
Aligns to 18:250 / 354 (65.8%), covers 100.0% of PF07933, 182.5 bits

6rh6A / Q8NC96 Solution structure and 1h, 13c and 15n chemical shift assignments for the complex of necap1 phear domain with phosphorylated ap2 mu2 148- 163 (see paper)
Aligns to 12:138 / 138 (92.0%), covers 79.1% of PF07933, 182.1 bits

Q84WV7 Adaptin ear-binding coat-associated protein 1 NECAP-1 from Arabidopsis thaliana
AT3G58600 hypothetical protein from Arabidopsis thaliana
Aligns to 32:192 / 302 (53.3%), covers 100.0% of PF07933, 178.2 bits

B5XFU5 Adaptin ear-binding coat-associated protein 1 from Salmo salar
Aligns to 7:152 / 164 (89.0%), covers 79.7% of PF07933, 171.0 bits

A8BII4 NECAP PHear domain-containing protein from Giardia intestinalis (strain ATCC 50803 / WB clone C6)
GL50803_17195 hypothetical protein from Giardia intestinalis
Aligns to 3:157 / 178 (87.1%), covers 100.0% of PF07933, 142.3 bits

Or search for genetic data about PF07933 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory