PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07946 (DUF1682)

PF07946.14 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

CCD47_HUMAN / Q96A33 Coiled-coil domain-containing protein 47; Calumin from Homo sapiens (Human) (see 2 papers)
NP_064583 coiled-coil domain-containing protein 47 precursor from Homo sapiens
Aligns to 135:467 / 483 (68.9%), covers 100.0% of PF07946, 315.8 bits

CCD47_MOUSE / Q9D024 Coiled-coil domain-containing protein 47; Adipocyte-specific protein 4; Calumin from Mus musculus (Mouse) (see paper)
NP_080285 coiled-coil domain-containing protein 47 precursor from Mus musculus
Aligns to 135:467 / 483 (68.9%), covers 100.0% of PF07946, 315.3 bits

Q5U2X6 Coiled-coil domain-containing protein 47 from Rattus norvegicus
Aligns to 135:467 / 483 (68.9%), covers 100.0% of PF07946, 315.3 bits

AT4G24330 hypothetical protein (RefSeq) from Arabidopsis thaliana
Q9STW1 At4g24330 from Arabidopsis thaliana
Aligns to 150:467 / 478 (66.5%), covers 100.0% of PF07946, 286.3 bits

NP_001314711 uncharacterized protein At5g49945-like precursor from Zea mays
Aligns to 157:475 / 485 (65.8%), covers 99.7% of PF07946, 274.8 bits

K1Q683 Coiled-coil domain-containing protein 47 from Crassostrea gigas
2 alignments in 153:448 / 460 (64.3%), covering up to 52.9% of PF07946, 246.5 bits

YN8B_YEAST / P53723 UPF0674 endoplasmic reticulum membrane protein YNR021W from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
YNR021W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNR021W is not an essential gene (RefSeq) from Saccharomyces cerevisiae
Aligns to 44:394 / 404 (86.9%), covers 100.0% of PF07946, 242.8 bits

M5XEL2 CS domain-containing protein from Prunus persica
Aligns to 2:124 / 296 (41.6%), covers 35.9% of PF07946, 29.8 bits

Or search for genetic data about PF07946 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory