PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF08522 (DUF1735)

PF08522.10 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BT0865, BT_0865 putative chitobiase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
2 alignments in 24:273 / 440 (53.6%), covering up to 84.2% of PF08522, 108.6 bits

BT4040 putative galactose oxidase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
2 alignments in 25:277 / 447 (54.1%), covering up to 90.8% of PF08522, 105.6 bits

BT1036 hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
2 alignments in 29:301 / 449 (59.7%), covering up to 87.5% of PF08522, 101.4 bits

BT1037, BT_1037 conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 18:137 / 395 (30.4%), covers 98.3% of PF08522, 88.2 bits

BT3790 hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 33:160 / 324 (39.5%), covers 95.0% of PF08522, 74.7 bits

BACOVA_03430 hypothetical protein (RefSeq) from Bacteroides ovatus ATCC 8483
Aligns to 30:161 / 344 (38.4%), covers 98.3% of PF08522, 73.3 bits

BT1045, BT_1045 hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 29:148 / 396 (30.3%), covers 93.3% of PF08522, 65.8 bits

BT2624 hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 31:160 / 321 (40.5%), covers 98.3% of PF08522, 64.6 bits

BT3986 putative patatin-like protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 32:150 / 384 (31.0%), covers 98.3% of PF08522, 62.4 bits

AAO79092.1 endo-β-N-acetylglucosaminidase (BT3987;BT_3987) (EC 3.2.1.96) (see protein)
Q8A0N4 Endo-beta-N-acetylglucosaminidase F1 from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
BT3987, BT_3987 endo-beta-N-acetylglucosaminidase F1 precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 44:163 / 476 (25.2%), covers 99.2% of PF08522, 62.0 bits

Ccan_17440 DUF1735 domain-containing protein from Capnocytophaga canimorsus Cc5
Aligns to 28:155 / 440 (29.1%), covers 85.8% of PF08522, 60.5 bits

BT4407 conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 30:145 / 391 (29.7%), covers 95.8% of PF08522, 57.9 bits

Ccan_08730 DUF1735 domain-containing protein from Capnocytophaga canimorsus Cc5
Aligns to 31:169 / 441 (31.5%), covers 96.7% of PF08522, 56.5 bits

D9RSV7 Putative endo-beta-N-acetylglucosaminidase H from Prevotella melaninogenica (strain ATCC 25845 / DSM 7089 / JCM 6325 / VPI 2381 / B282)
Aligns to 39:157 / 452 (26.3%), covers 80.0% of PF08522, 55.0 bits

BACCELL_00844 hypothetical protein (RefSeq) from Bacteroides cellulosilyticus DSM 14838
Aligns to 54:185 / 490 (26.9%), covers 79.2% of PF08522, 42.8 bits

Or search for genetic data about PF08522 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory