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Family Search for PF08551 (DUF1751)

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Running HMMer for PF08551

PF08551 hits 21 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

TM115_YEAST / Q12239 Transmembrane protein 115 homolog from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
YOL107W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and colocalizes in a punctate pattern with the early golgi/COPI vesicles; YOL107W is not an essential protein from Saccharomyces cerevisiae
Aligns to 72:170 / 342 (28.9%), covers 100.0% of PF08551, 110.7 bits

AT3G07950 rhomboid protein-related from Arabidopsis thaliana
Aligns to 44:142 / 304 (32.6%), covers 100.0% of PF08551, 109.7 bits

B4FAA8 Rhomboid-like protein 19 from Zea mays
Aligns to 67:165 / 319 (31.0%), covers 100.0% of PF08551, 106.6 bits

NP_609033 uncharacterized protein, isoform A from Drosophila melanogaster
Aligns to 54:157 / 450 (23.1%), covers 100.0% of PF08551, 101.1 bits

TM115_HUMAN / Q12893 Transmembrane protein 115; Placental protein 6; Protein PL6 from Homo sapiens (Human) (see 3 papers)
NP_008955 transmembrane protein 115 from Homo sapiens
Aligns to 49:151 / 351 (29.3%), covers 100.0% of PF08551, 99.8 bits

NP_062678 transmembrane protein 115 from Mus musculus
Q9WUH1 Transmembrane protein 115 from Mus musculus
Aligns to 49:151 / 350 (29.4%), covers 100.0% of PF08551, 99.2 bits

Q46G03 Rhomboid protein from Methanosarcina barkeri (strain Fusaro / DSM 804)
Aligns to 43:135 / 207 (44.9%), covers 62.6% of PF08551, 31.0 bits

Q1D006 Rhomboid family intramembrane serine protease from Myxococcus xanthus (strain DK1622)
Aligns to 52:152 / 242 (41.7%), covers 66.7% of PF08551, 30.7 bits

SPD_1920 peptidase, S54 (rhomboid) family protein from Streptococcus pneumoniae D39
SPN23F_21180 rhomboid family membrane protein from Streptococcus pneumoniae ATCC 700669
Aligns to 49:144 / 225 (42.7%), covers 60.6% of PF08551, 29.7 bits

C9ZUV6 Rhomboid-like protein, putative from Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)
Aligns to 36:133 / 312 (31.4%), covers 74.7% of PF08551, 28.4 bits

NCU03459 UBA domain-containing protein Ucp14 from Neurospora crassa OR74A
Aligns to 39:134 / 275 (34.9%), covers 62.6% of PF08551, 27.4 bits

alr3774 hypothetical protein from Nostoc sp. PCC 7120
Aligns to 65:155 / 231 (39.4%), covers 60.6% of PF08551, 27.1 bits

PH197_05505 rhomboid family intramembrane serine protease from Leuconostoc lactis
Aligns to 52:144 / 229 (40.6%), covers 72.7% of PF08551, 26.8 bits

ID870_07305 rhomboid family intramembrane serine protease from Streptococcus agalactiae CJB111
Aligns to 50:143 / 225 (41.8%), covers 71.7% of PF08551, 26.4 bits

Nmag_1128 Rhomboid family protein from Natrialba magadii ATCC 43099
Aligns to 122:198 / 319 (24.1%), covers 62.6% of PF08551, 26.2 bits

D4GT94 rhomboid protease (EC 3.4.21.105) from Haloferax volcanii (see paper)
HVO_0727 rhomboid-like intramembrane serine protease, N-terminal Zn finger from Haloferax volcanii DS2
Aligns to 117:214 / 296 (33.1%), covers 88.9% of PF08551, 25.2 bits

AKL23_RS08625 rhomboid family intramembrane serine protease from Streptococcus thermophilus
Aligns to 48:142 / 224 (42.4%), covers 68.7% of PF08551, 24.5 bits

stu1836 Conserved hypothetical, predicted membrane protein (TMS6) from Streptococcus thermophilus LMG 18311
Aligns to 48:142 / 224 (42.4%), covers 65.7% of PF08551, 23.9 bits

A9497_05030 rhomboid family intramembrane serine protease from Streptococcus thermophilus
Aligns to 50:142 / 224 (41.5%), covers 66.7% of PF08551, 23.8 bits

CCC13826_1263 peptidase E from Campylobacter concisus 13826
Aligns to 38:135 / 191 (51.3%), covers 88.9% of PF08551, 23.2 bits

CPE1452 conserved hypothetical protein from Clostridium perfringens str. 13
Aligns to 194:268 / 342 (21.9%), covers 57.6% of PF08551, 22.6 bits

Or search for genetic data about PF08551 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory