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Family Search for PF08551 (DUF1751)

Running HMMer for PF08551

PF08551 hits 22 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

TM115_YEAST / Q12239 Transmembrane protein 115 homolog from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
YOL107W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and colocalizes in a punctate pattern with the early golgi/COPI vesicles; YOL107W is not an essential protein from Saccharomyces cerevisiae
Aligns to 72:170 / 342 (28.9%), covers 100.0% of PF08551, 110.7 bits

AT3G07950 rhomboid protein-related from Arabidopsis thaliana
Aligns to 44:142 / 304 (32.6%), covers 100.0% of PF08551, 109.7 bits

B4FAA8 Rhomboid-like protein 19 from Zea mays
Aligns to 67:165 / 319 (31.0%), covers 100.0% of PF08551, 106.6 bits

NP_609033 uncharacterized protein, isoform A from Drosophila melanogaster
Aligns to 54:157 / 450 (23.1%), covers 100.0% of PF08551, 101.1 bits

TM115_HUMAN / Q12893 Transmembrane protein 115; Placental protein 6; Protein PL6 from Homo sapiens (Human) (see 3 papers)
NP_008955 transmembrane protein 115 from Homo sapiens
Aligns to 49:151 / 351 (29.3%), covers 100.0% of PF08551, 99.8 bits

Q9WUH1 Transmembrane protein 115 from Mus musculus
NP_062678 transmembrane protein 115 from Mus musculus
Aligns to 49:151 / 350 (29.4%), covers 100.0% of PF08551, 99.2 bits

Q46G03 Rhomboid protein from Methanosarcina barkeri (strain Fusaro / DSM 804)
Aligns to 43:135 / 207 (44.9%), covers 62.6% of PF08551, 31.0 bits

Q1D006 Rhomboid family intramembrane serine protease from Myxococcus xanthus (strain DK1622)
Aligns to 52:152 / 242 (41.7%), covers 66.7% of PF08551, 30.7 bits

SPD_1920 peptidase, S54 (rhomboid) family protein from Streptococcus pneumoniae D39
SPN23F_21180 rhomboid family membrane protein from Streptococcus pneumoniae ATCC 700669
Aligns to 49:144 / 225 (42.7%), covers 60.6% of PF08551, 29.7 bits

C9ZUV6 Rhomboid-like protein, putative from Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)
Aligns to 36:133 / 312 (31.4%), covers 74.7% of PF08551, 28.4 bits

SVXNc_0214 rhomboid family intramembrane serine protease from Candidatus Nanohalococcus occultus
Aligns to 134:234 / 315 (32.1%), covers 68.7% of PF08551, 27.6 bits

NCU03459 UBA domain-containing protein Ucp14 from Neurospora crassa OR74A
Aligns to 39:134 / 275 (34.9%), covers 62.6% of PF08551, 27.4 bits

alr3774 hypothetical protein from Nostoc sp. PCC 7120
Aligns to 65:155 / 231 (39.4%), covers 60.6% of PF08551, 27.1 bits

PH197_05505 rhomboid family intramembrane serine protease from Leuconostoc lactis
Aligns to 52:144 / 229 (40.6%), covers 72.7% of PF08551, 26.8 bits

ID870_07305 rhomboid family intramembrane serine protease from Streptococcus agalactiae CJB111
Aligns to 50:143 / 225 (41.8%), covers 71.7% of PF08551, 26.4 bits

Nmag_1128 Rhomboid family protein from Natrialba magadii ATCC 43099
Aligns to 122:198 / 319 (24.1%), covers 62.6% of PF08551, 26.2 bits

D4GT94 rhomboid protease (EC 3.4.21.105) from Haloferax volcanii (see paper)
HVO_0727 rhomboid-like intramembrane serine protease, N-terminal Zn finger from Haloferax volcanii DS2
Aligns to 117:214 / 296 (33.1%), covers 88.9% of PF08551, 25.2 bits

AKL23_RS08625 rhomboid family intramembrane serine protease from Streptococcus thermophilus
Aligns to 48:142 / 224 (42.4%), covers 68.7% of PF08551, 24.5 bits

stu1836 Conserved hypothetical, predicted membrane protein (TMS6) from Streptococcus thermophilus LMG 18311
Aligns to 48:142 / 224 (42.4%), covers 65.7% of PF08551, 23.9 bits

A9497_05030 rhomboid family intramembrane serine protease from Streptococcus thermophilus
Aligns to 50:142 / 224 (41.5%), covers 66.7% of PF08551, 23.8 bits

CCC13826_1263 peptidase E from Campylobacter concisus 13826
Aligns to 38:135 / 191 (51.3%), covers 88.9% of PF08551, 23.2 bits

CPE1452 conserved hypothetical protein from Clostridium perfringens str. 13
Aligns to 194:268 / 342 (21.9%), covers 57.6% of PF08551, 22.6 bits

Or search for genetic data about PF08551 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory