PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF08878 (DUF1837)

PF08878.11 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SSA_1888 hypothetical protein (NCBI) from Streptococcus sanguinis SK36
Aligns to 36:288 / 311 (81.4%), covers 99.6% of PF08878, 205.7 bits

UC7_RS13845 DUF1837 domain-containing protein from Enterococcus caccae ATCC BAA-1240
Aligns to 40:295 / 317 (80.8%), covers 100.0% of PF08878, 175.6 bits

AbpA / b2628 CP4-57 prophage; anti-bacteriophage protein from Escherichia coli K-12 substr. MG1655 (see 5 papers)
P52127 Uncharacterized protein YfjL from Escherichia coli (strain K12)
NP_417117 CP4-57 prophage; anti-bacteriophage protein from Escherichia coli str. K-12 substr. MG1655
b2628 CP4-57 prophage; predicted protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 294:520 / 538 (42.2%), covers 99.6% of PF08878, 122.3 bits

WP_055648496 DUF1837 domain-containing protein from Shewanella sp. Sh95
Aligns to 61:271 / 291 (72.5%), covers 73.6% of PF08878, 51.8 bits

Or search for genetic data about PF08878 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory