Family Search for PF08909 (DUF1854)

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PF08909 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

RR42_RS04420 required for efflux of an amino acid polymer from Cupriavidus basilensis FW507-4G11
Aligns to 30:159 / 160 (81.2%), covers 100.0% of PF08909, 176.8 bits

• mutant phenotype: PFam PF08909.7 (DUF1854). In a conserved cofit operon with a mdlB-like transporter (RR42_RS04415) and with two (apparently cytoplasmic) cyanophycin synthetase-like genes that produce a different polymer (RR42_RS04410 and RR42_RS04405, see PMID:23224585)

Ac3H11_4058 required for efflux of an amino acid polymer from Acidovorax sp. GW101-3H11
Aligns to 38:168 / 169 (77.5%), covers 100.0% of PF08909, 159.5 bits

• mutant phenotype: PFam PF08909.7 (DUF1854). In a conserved cofit operon with a mdlB-like transporter (Ac3H11_4059) and with two cyanophycin synthetase-like genes that produce a different polymer (Ac3H11_4060 and Ac3H11_4061, see PMID:23224585)

SSO3012 ABC transporter, ATP binding protein from Sulfolobus solfataricus P2
Aligns to 736:862 / 863 (14.7%), covers 99.2% of PF08909, 127.1 bits

• Appendage-mediated surface adherence of Sulfolobus solfataricus
  Zolghadr, Journal of bacteriology 2010
  • “...SSO3004 SSO3006 SSO3007 SSO3008 SSO3009 SSO3010 SSO3011 SSO3012 SSO3013 SSO3014 SSO3015 SSO3016 SSO3017 SSO3019 SSO3021 SSO3022 SSO3029 SSO3032 SSO3034 SSO3035...”
• Dynamic metabolic adjustments and genome plasticity are implicated in the heat shock response of the extremely thermoacidophilic archaeon Sulfolobus solfataricus
  Tachdjian, Journal of bacteriology 2006
  • “...SSO2849 SSO2850 SSO1000 SSO1170 SSO3053 SSO2035 SSO2135 SSO2137 SSO2228 SSO2704 SSO3012 4.3 4.6 4.0 4.9 4.9 4.6 2.1 2.5 4.0 2.3 2.1 6.5 3.5 3.0 2.5 2.0 2.1 16.0...”
• Characterization and functional complementation of a nonlethal deletion in the chromosome of a beta-glycosidase mutant of Sulfolobus solfataricus
  Bartolucci, Journal of bacteriology 2003
  • “...to 1528) of an ORF encoding a putative ABC transporter-ATPase (sso3012); this region was found to be fused to a shorter sequence (234 bp) with high identity (98...”
  • “...the fragment was identical to part of ORF sso3012, encoding a putative ABC transporter (uppercase letters), abruptly interrupted by a shorter DNA element...”

Saci_2123 ABC transporter from Sulfolobus acidocaldarius DSM 639
Aligns to 734:860 / 861 (14.8%), covers 98.5% of PF08909, 107.7 bits

• How a Genetically Stable Extremophile Evolves: Modes of Genome Diversification in the Archaeon Sulfolobus acidocaldarius
  Mao, Journal of bacteriology 2017
  • “...into the center of an ORF that corresponds to Saci_2123 of DSM639 and that encodes a putative ABC-type transporter. The inserted sequences are identical in the...”
  • “...and are defined by the hexanucleotide CCTAGG in Saci_2123 (DSM639 nt 1947723 to 1947728). This hexanucleotide also occurs once in the published STIV sequence,...”
• The saci_2123 gene of the hyperthermoacidophile Sulfolobus acidocaldarius encodes an ATP-binding cassette multidrug transporter
  Yang, Extremophiles : life under extreme conditions 2015 (PubMed)
  • “...saci_2123 gene of the hyperthermoacidophile Sulfolobus acidocaldarius encodes an ATP-binding cassette multidrug transporter Nuan Yang * Arnold J. M. Driessen Received:...”
  • “...subunits are fused into a single polypeptide. The saci_2123 gene of the thermoacidophilic archaeon Sulfolobus acidocaldarius is the only gene in the genome that...”

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