Family Search for PF09148 (DUF1934)

PF09148 hits 6 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

OG1RF_10922 DUF1934 domain-containing protein from Enterococcus faecalis OG1RF
Aligns to 11:141 / 145 (90.3%), covers 100.0% of PF09148, 114.4 bits

• ClpP participates in stress tolerance, biofilm formation, antimicrobial tolerance, and virulence of Enterococcus faecalis
  Zheng, BMC microbiology 2020
  • “...( OG1RF_11829, sufC ) ABC superfamily ATP binding cassette transporter, ABC protein 1.208 AEA93609.1 ( OG1RF_10922 ) hypothetical protein 1.204 AEA93584.1 ( OG1RF_10897 ) glutamine ABC superfamily ATP binding cassette transporter, binding protein 1.200 Abundance-decreased AEA92854.1 ( OG1RF_10167, rplR ) 50S ribosomal protein L18 0.828 AEA93526.1...”

YWIB_BACSU / O07624 Uncharacterized beta-barrel protein YwiB from Bacillus subtilis (strain 168)
BSU37340 hypothetical protein from Bacillus subtilis subsp. subtilis str. 168
Aligns to 9:134 / 142 (88.7%), covers 99.2% of PF09148, 113.2 bits

• subunit: Homodimer.
• Distinct co-evolution patterns of genes associated to DNA polymerase III DnaE and PolC
  Engelen, BMC genomics 2012
  • “..._ putative sortase BSU36910 ywlG " _ conserved hypothetical protein; present in Archaea and Eukarya BSU37340 ywiB " _ putative RNA binding protein possibly involved in aminoacyl-tRNA editing 2 RNA binding BSU38499 ywzH " _ conserved hypothetical protein BSU40939 yyzM " _ conserved hypothetical protein 1:...”

HMPREF0351_12076 DUF1934 domain-containing protein from Enterococcus faecium DO
Aligns to 11:141 / 145 (90.3%), covers 99.2% of PF09148, 112.2 bits

• The LiaFSR and BsrXRS Systems Contribute to Bile Salt Resistance in Enterococcus faecium Isolates
  Zhou, Frontiers in microbiology 2019
  • “...HMPREF0351_11748 Response regulator T HMPREF0351_11749 Hypothetical protein S 3824662 HMPREF0351_11750 HAD superfamily hydrolase S 3824769 HMPREF0351_12076 Hypothetical protein S 1107358 HMPREF0351_12077 Lipoateprotein ligase A H HMPREF0351_12078 HD family metal-dependent phosphohydrolase S HMPREF0351_12079 HAD superfamily hydrolase S 3824741 HMPREF0351_11989 Thioredoxin-disulfide reductase O 3824782 HMPREF0351_12122 GNAT family acetyltransferase...”
  • “...), bsrR ( HMPREF0351_11748 ), bsrS ( HMPREF0351_11747 ), 11750 ( HMPREF0351_11750 ), 12076 ( HMPREF0351_12076 ), lplA ( HMPREF0351_12077 ), 12078 ( HMPREF0351_12078 ), 12079 ( HMPREF0351_12079 ), 11989 ( HMPREF0351_11989 ), 12122 ( HMPREF0351_12122 ), 10965 ( HMPREF0351_10965 ), 11678 ( HMPREF0351_11678 ), 10295...”

lp_0479 unknown from Lactobacillus plantarum WCFS1
Aligns to 30:160 / 164 (79.9%), covers 100.0% of PF09148, 107.5 bits

• Response of Lactobacillus plantarum WCFS1 to the Gram-Negative Pathogen-Associated Quorum Sensing Molecule N-3-Oxododecanoyl Homoserine Lactone
  Spangler, Frontiers in microbiology 2019
  • “...-0.26 MTLD_LACPL lp_0233 mtlD Mannitol-1-phosphate 5-dehydrogenase -0.71 -0.34 F9UT36_LACPL lp_0235 Hypothetical protein -0.55 -0.69 F9UKW1_LACPL lp_0479 Hypothetical protein 0.55 1.09 F9UL19_LACPL lp_0546 hprT Hypoxanthine phosphoribosyltransferase 0.50 0.93 HSLO_LACPL lp_0548 hsp33 Heat shock protein -0.86 -0.30 F9UL33_LACPL lp_0562 nagA N -acetylglucosamine -6-phosphate deacetylase 0.70 0.37 RL11_LACPL lp_0619...”

SA0563 hypothetical protein from Staphylococcus aureus subsp. aureus N315
Aligns to 9:135 / 142 (89.4%), covers 100.0% of PF09148, 107.1 bits

• Global transcriptome analysis of Staphylococcus aureus biofilms in response to innate immune cells
  Scherr, Infection and immunity 2013
  • “...SA1254 SA2137 SA2736 SA1137 SA1569 SA1794 SA1285 SA1205 SA0563 SA1495 SA0432 SA1107 SA0540 SA0970 SA1839 SA1523 SA0513 SA1752 SA2131 SA0314 SA1323 SA1832 SA1065...”

SpyM3_0439 conserved hypothetical protein from Streptococcus pyogenes MGAS315
Aligns to 3:125 / 128 (96.1%), covers 98.4% of PF09148, 65.7 bits

• Novel regulatory small RNAs in Streptococcus pyogenes
  Tesorero, PloS one 2013
  • “...SSRC 9 SPyM3_0300 methionyl-tRNA synthetase >>> SPyM3_0301 ribonucleotide-diphosphate reductase subunit beta >>> Q, Z SSRC10 SPyM3_0439 hypothetical protein >>> SPyM3_0440 putative calcium transporter >>> Q, P SSRC11 SPyM3_0455 putative cell-division protein >>> SPyM3_0457 putative metallo-beta-lactamase superfamily protein <<< Q, Z SSRC12 * SPyM3_0480 streptolysin S associated...”

Or search for genetic data about PF09148 in the Fitness Browser