PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF09186 (DUF1949)

PF09186.11 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BSU35510 hypothetical protein (RefSeq) from Bacillus subtilis subsp. subtilis str. 168
P32437 IMPACT family member YvyE from Bacillus subtilis (strain 168)
Aligns to 140:195 / 217 (25.8%), covers 98.2% of PF09186, 64.8 bits

BH3630 hypothetical protein (NCBI) from Bacillus halodurans C-125
Aligns to 140:195 / 213 (26.3%), covers 98.2% of PF09186, 62.6 bits

SCO1302 hypothetical protein (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 140:195 / 208 (26.9%), covers 98.2% of PF09186, 56.9 bits

Z5370 orf, hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 142:197 / 205 (27.3%), covers 98.2% of PF09186, 55.8 bits

YigZ / b3848 IMPACT family member YigZ from Escherichia coli K-12 substr. MG1655 (see 7 papers)
YIGZ_ECOLI / P27862 IMPACT family member YigZ from Escherichia coli (strain K12) (see paper)
yigZ / RF|NP_418290 IMPACT family member yigZ from Escherichia coli K12 (see paper)
Aligns to 141:196 / 204 (27.5%), covers 98.2% of PF09186, 55.0 bits

X276_04450 YigZ family protein from Clostridium beijerinckii NRRL B-598
Aligns to 138:193 / 215 (26.0%), covers 98.2% of PF09186, 53.4 bits

lmo2516 similar to conserved hypothetical proteins (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 140:195 / 211 (26.5%), covers 100.0% of PF09186, 51.2 bits

SA0703 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
Aligns to 140:195 / 213 (26.3%), covers 100.0% of PF09186, 50.4 bits

P44842 IMPACT family member HI_0722 from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Aligns to 141:196 / 206 (27.2%), covers 100.0% of PF09186, 49.8 bits

HI0722 hypothetical protein (NCBI) from Haemophilus influenzae Rd KW20
Aligns to 145:200 / 210 (26.7%), covers 100.0% of PF09186, 49.7 bits

SAUSA300_0732 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus USA300_FPR3757
Aligns to 140:195 / 213 (26.3%), covers 100.0% of PF09186, 48.6 bits

SP_2209 hypothetical protein (RefSeq) from Streptococcus pneumoniae TIGR4
Aligns to 138:193 / 211 (26.5%), covers 100.0% of PF09186, 47.4 bits

spr2014 Conserved hypothetical protein (NCBI ptt file) from Streptococcus pneumoniae R6
Aligns to 138:193 / 211 (26.5%), covers 100.0% of PF09186, 46.6 bits

LLKF_1118 hypothetical protein (RefSeq) from Lactococcus lactis subsp. lactis KF147
Aligns to 137:192 / 209 (26.8%), covers 100.0% of PF09186, 39.9 bits

SMc01701 CONSERVED HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 131:187 / 194 (29.4%), covers 100.0% of PF09186, 39.0 bits

G7SDH9 Uncharacterized protein from Streptococcus suis D12
Aligns to 139:194 / 210 (26.7%), covers 100.0% of PF09186, 28.0 bits

FTN_0466 hypothetical protein (NCBI) from Francisella tularensis subsp. novicida U112
Aligns to 139:194 / 200 (28.0%), covers 100.0% of PF09186, 27.8 bits

FTA_0467 hypothetical protein (RefSeq) from Francisella tularensis subsp. holarctica FTA
Aligns to 139:194 / 200 (28.0%), covers 100.0% of PF09186, 27.0 bits

Or search for genetic data about PF09186 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory