Family Search for PF09822 (ABC_transp_aux)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF09822 hits 21 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

THC0290_1849 gliding motility-associated ABC transporter substrate-binding protein GldG from Flavobacterium psychrophilum
Aligns to 32:318 / 559 (51.3%), covers 100.0% of PF09822, 296.6 bits

• More Than Gliding: Involvement of GldD and GldG in the Virulence of Flavobacterium psychrophilum
  Pérez-Pascual, Frontiers in microbiology 2017
  • “...named gldG::Tn , the Tn 4351 transposon is located after position 2,148,164 and disrupts the THC0290_1849 gene that encodes the gliding motility transmembrane protein GldG (protein_id = SHI04365.1), leading to a truncated protein after residue 307 (out of a total of 559). GldG likely forms along...”

TC 3.A.1.132.1 / Q93LN0 GldG, component of The GldAFG putative ABC transporter required for ratchet-type gliding motility; may function in secretion of a macromolecule such as an exopolysaccharide. (Agarwal et al., 1997; Hunnicutt et al., 2002; McBride and Zhu 2013). Soluble GldG homologues (no TMSs) are found in eukaryotes (e.g. intraflagellar protein transporter, IPT52 of Chlamydomonas reinhardtii; XP_001692161) from Cytophaga johnsonae (Flavobacterium johnsoniae) (see paper)
Fjoh_2721 ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein from Flavobacterium johnsoniae UW101
Aligns to 32:319 / 561 (51.3%), covers 100.0% of PF09822, 292.6 bits

• substrates: Exopolysaccharides, macromolecules
• Design Principles of the Rotary Type 9 Secretion System
  Trivedi, Frontiers in microbiology 2022
  • “...GldF is required for the stability of GldK/PorK ( Johnston et al., 2018 ). GldG (Fjoh_2721). Cells lacking GldG are non-motile ( Hunnicutt et al., 2002 ). GldG is predicted to be a transmembrane protein that interacts with GldA to form an ABC transporter ( Agarwal...”

Gilli_3446 gliding motility-associated ABC transporter substrate-binding protein GldG from Gillisia limnaea DSM 15749
Aligns to 30:317 / 557 (51.7%), covers 99.6% of PF09822, 278.5 bits

• Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T))
  Riedel, Standards in genomic sciences 2012
  • “...(Gilli_2923), gld C (Gilli_2942), gld D (Gilli_1840), gld E (Gilli_1841), gld F (Gilli_3447), gld G (Gilli_3446), gld H (Gilli_2158), gld I (Gilli_0258), gld J (Gilli_1638), gld K (Gilli_2747), gld L (Gilli_2748), gld M (Gilli_2749), gld N (Gilli_2750), esp A (Gilli_3049), esp B (Gilli_3050), rem B (Gilli_2697),...”

DCC35_RS07265 gliding motility-associated ABC transporter substrate-binding protein GldG from Mangrovivirga cuniculi
Aligns to 33:315 / 565 (50.1%), covers 100.0% of PF09822, 260.1 bits

• Mangrovivirga cuniculi gen. nov., sp. nov., a moderately halophilic bacterium isolated from bioturbated Red Sea mangrove sediment, and proposal of the novel family Mangrovivirgaceae fam. nov
  Sefrji, International journal of systematic and evolutionary microbiology 2021
  • “...glcG , gldJ , gldL , gldM , gldN , DCC35_RS07255, DCC35_RS14410, DCC35_RS02560, DCC35_RS02550, DCC35_RS07260, DCC35_RS07265, DCC35_RS02080, DCC35_RS02985, DCC35_RS02990, DCC35_RS02995), it was non-motile in an in vitro test in semisolid medium. However, we noted the absence of some of the genes of the cluster ( gldB...”

AS87_RS00460 gliding motility-associated ABC transporter substrate-binding protein GldG from Riemerella anatipestifer Yb2
Aligns to 29:311 / 555 (51.0%), covers 100.0% of PF09822, 258.8 bits

• Riemerella anatipestifer GldG is necessary for secretion of effectors by type IX secretion system
  Chen, Veterinary microbiology 2023 (PubMed)
  • “...factors. In our previous study, the disruption of AS87_RS00460 gene, which encodes the predicted protein GldG, significantly reduced the bacterial virulence of...”

PA3670 hypothetical protein from Pseudomonas aeruginosa PAO1
PA14_16890 putative auxiliary component of ABC transporter from Pseudomonas aeruginosa UCBPP-PA14
Aligns to 33:301 / 615 (43.7%), covers 100.0% of PF09822, 238.4 bits

• Static Growth Promotes PrrF and 2-Alkyl-4(1H)-Quinolone Regulation of Type VI Secretion Protein Expression in Pseudomonas aeruginosa
  Brewer, Journal of bacteriology 2020 (secret)
• Multidrug Adaptive Resistance of Pseudomonas aeruginosa Swarming Cells
  Coleman, Antimicrobial agents and chemotherapy 2020 (secret)
• Genome-wide patterns of recombination in the opportunistic human pathogen Pseudomonas aeruginosa
  Dettman, Genome biology and evolution 2014
  • “...binding and transport PA4235 bfrA , bacterioferritin A (cytochrome b1), ferric iron binding and transport PA3670 Auxiliary component of ABC transporter, gliding motility PA3597 Amino acid permease, ABC transporter PA3520 Putative heavy metal binding protein, transport/detoxification, copper binding PA4541 lepA , secreted protease, filamentous hemagglutinin, adherance...”
• Genomewide identification of genetic determinants of antimicrobial drug resistance in Pseudomonas aeruginosa
  Dötsch, Antimicrobial agents and chemotherapy 2009
  • “...PA2615e PA2800 PA3011 PA3110 PA3160 PA3233 PA3351 PA3647e PA3670 PA3800 PA3976 PA4005 PA4269 PA4441 PA4456 PA4459e PA4727 PA4745e PA4753 PA4853e PA5198 PA5288...”
  • “...to be hypersusceptible by the agar dilution method (PA3670, PA4456, PA4459, the fis mutant, and PA5198). Mutations within the MexAB-oprM multidrug efflux pump,...”
• Pseudomonas 2007
  Goldberg, Journal of bacteriology 2008
  • “...identify four proteins that interact with FimX: PA0020, PA3670, PA4461, and FlhF. Overexpression of PA3670 (GldG), an ABC transporter, led to complete...”
  • “...pili still appeared on the bacterial surface. Intriguingly, PA3670 was localized to the pole, in a FimX-dependent manner. The envelope-associated protein PA0020...”
• Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA
  Hunnicutt, Journal of bacteriology 2002
  • “...(23% identity over 561 amino acids) (10) and P. aeruginosa PA3670 (23% identity over 259 amino acids) (51). fjo15 lies upstream of gldF. The stop codon of fjo15...”
• Substrate Binding Protein DppA1 of ABC Transporter DppBCDF Increases Biofilm Formation in Pseudomonas aeruginosa by Inhibiting Pf5 Prophage Lysis
  Lee, Frontiers in microbiology 2018
  • “...many transport genes control swarming motility in P. aeruginosa (e.g., PA14_48280, PA14_40620, PA14_30660, PA14_20110, and PA14_16890) ( Yeung et al., 2009 ), we examined swarming motility for dppA1 and found that this mutation abolished swarming in the first 8 h; this phenotype could be complemented by...”
• Genomewide identification of genetic determinants of antimicrobial drug resistance in Pseudomonas aeruginosa
  Dötsch, Antimicrobial agents and chemotherapy 2009
  • “...PA14_23890 PA14_23360 PA14_22370 PA14_20730 PA14_17170 PA14_16890 PA14_14910 PA14_12400 PA14_12030 PA14_08780 PA14_57690 PA14_57880 PA14_57910 PA14_62560...”
  • “...PA14_19170 PA14_18080 PA14_18060 PA14_18050 PA14_17500 PA14_16890 PA14_16500 PA14_16470 PA14_16280 PA14_16130 PA14_14520 PA14_14470 PA14_14380 PA14_11900...”

PA4039 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 33:293 / 600 (43.5%), covers 98.9% of PF09822, 220.1 bits

• Within-Host Evolution of the Dutch High-Prevalent Pseudomonas aeruginosa Clone ST406 during Chronic Colonization of a Patient with Cystic Fibrosis
  van, PloS one 2016
  • “...secE Intracellular trafficking, secretion, and vesicular transport [ 13 ] 5091 ACC[T] > GCC[A] 460 PA4039 Cell motility [ 13 ] 1522 ACG[T] > GCG[A] 1063 PA2727 + PA2728 Replication, recombination and repair [ 13 ] 4626 AGC[S] > AGA[R] 224 PA2385 b pvdQ General function...”

Q2SDB0 ABC-type transport system involved in multi-copper enzyme maturation, permease component from Hahella chejuensis (strain KCTC 2396)
2 alignments in 280:692 / 978 (42.2%), covering up to 93.2% of PF09822, 198.0 bits

• Bioinformatic analyses of integral membrane transport proteins encoded within the genome of the planctomycetes species, Rhodopirellula baltica
  Paparoditis, Biochimica et biophysica acta 2014
  • “...3.A.1.125.3 Q2J9P4 10 proteins lipoprotein Q7UST0 4 3.A.1.132.1 Q93LN1 6 polysaccharide exopolysaccharide Q7ULI7 12 3.A.1.132.4 Q2SDB0 8 unknown unknown Q7UXL8 10 3.A.1.141.1 P74757 5 multiple drugs ethyl viologen Q7UQG6 6 3.A.1.141.2 Q8R6Q5 6 unknown unknown Q7UQG5 7 3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase...”

BB0752 B. burgdorferi predicted coding region BB0752 from Borrelia burgdorferi B31
Aligns to 31:287 / 502 (51.2%), covers 100.0% of PF09822, 171.2 bits

• Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA
  Hunnicutt, Journal of bacteriology 2002
  • “...proteins of ABC transporters, such as Borrelia burgdorferi BB0752 (23% identity over 561 amino acids) (10) and P. aeruginosa PA3670 (23% identity over 259...”

TPASS_0879 hypothetical protein from Treponema pallidum subsp. pallidum SS14
TP0879 conserved hypothetical protein from Treponema pallidum subsp. pallidum str. Nichols
Aligns to 29:287 / 493 (52.5%), covers 100.0% of PF09822, 140.5 bits

• Correction: Identification of Functional Candidates amongst Hypothetical Proteins of Treponema pallidum ssp. pallidum
  Naqvi, PloS one 2018
  • “...Glycoprotease 169. HP TPASS_0877 6333357 B2S4B4 Metal dependent phosphohydrolases with conserved 'HD' motif 170. HP TPASS_0879 6333063 B2S4B6 ABC transporter 171. HP TPASS_0882 6332835 B2S4B9 ARM repeat containing protein(intracellular signalling and cytoskeletal regulation) 172. HP TPASS_0883 6333652 B2S4C0 Permease YjgP/YjgQ 173. HP TPASS_0884 6333655 B2S4C1 Permease...”
• Identification of functional candidates amongst hypothetical proteins of Treponema pallidum ssp. pallidum
  Naqvi, PloS one 2015
  • “...M23 (LysM domain) HP TPASS_0876 6333657 B2S4B2 ATP-binding protein HP TPASS_0877 6333357 B2S4B3 Glycoprotease HP TPASS_0879 6333063 B2S4B4 Metal dependent phosphohydrolases with conserved 'HD' motif HP TPASS_0882 6332835 B2S4B6 ABC transporter HP TPASS_0883 6333652 B2S4B9 ARM repeat containing protein(intracellular signalling and cytoskeletal regulation) HP TPASS_0884 6333655...”
• Identification of the Treponema pallidum subsp. pallidum TP0092 (RpoE) regulon and its implications for pathogen persistence in the host and syphilis pathogenesis
  Giacani, Journal of bacteriology 2013
  • “...synthase (HisT) 10 787 956607-957110/504 12 4.6E3 TP0879 Conserved hypothetical protein 15 372 956615-957220/606 8 0.01 10 794 961312-962194/883 8 0.03...”
  • “...896354-896930/577 TP0830 956615-957110/496 961327-962194/868 TP0879 TP0883 974760-975600/840 996484-997006/523 1024566-1025212/647 TP0896 TP0919 TP0941d...”

Athe_2368 hypothetical protein from Anaerocellum thermophilum DSM 6725
Athe_2368 GldG family protein from Caldicellulosiruptor bescii DSM 6725
Aligns to 48:289 / 485 (49.9%), covers 100.0% of PF09822, 120.3 bits

• The diversity and specificity of the extracellular proteome in the cellulolytic bacterium Caldicellulosiruptor bescii is driven by the nature of the cellulosic growth substrate
  Poudel, Biotechnology for biofuels 2018
  • “...on complex C5 substrates, such as switchgrass and xylan. Some proteins, such as Athe_0614 and Athe_2368, whose functions are not well defined were predicted to be involved in xylan utilization and ABC transport and were significantly more abundant in complex and C5 substrates, respectively. The proteins...”
  • “...xylose but was also significantly more abundant on all of the simple growth substrates. Similarly, Athe_2368, which contains Pfam domain PF09822 that functions as an ABC-type uncharacterized transporter, was significantly more abundant during growth on both complex and C5 substrates. Athe_1880, specific towards complex substrates (Figs....”

Q7UXL8 Probable permease of ABC transporter from Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
Aligns to 351:612 / 990 (26.5%), covers 87.2% of PF09822, 115.2 bits

• Bioinformatic analyses of integral membrane transport proteins encoded within the genome of the planctomycetes species, Rhodopirellula baltica
  Paparoditis, Biochimica et biophysica acta 2014
  • “...lipoprotein Q7UST0 4 3.A.1.132.1 Q93LN1 6 polysaccharide exopolysaccharide Q7ULI7 12 3.A.1.132.4 Q2SDB0 8 unknown unknown Q7UXL8 10 3.A.1.141.1 P74757 5 multiple drugs ethyl viologen Q7UQG6 6 3.A.1.141.2 Q8R6Q5 6 unknown unknown Q7UQG5 7 3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily 3.A.2.1.2 P21904...”

Bd1025 ABC-type transport system involved in gliding motility from Bdellovibrio bacteriovorus HD100
Aligns to 94:322 / 511 (44.8%), covers 99.6% of PF09822, 107.2 bits

• Bdellovibrio bacteriovorus HD100, a predator of Gram-negative bacteria, benefits energetically from Staphylococcus aureus biofilms without predation
  Im, The ISME journal 2018
  • “...annotated as a transporter related with gliding motility (Bd1025), a chemotaxis protein (CheX, Bd1823) and a hypothetical protein located within a flagellar...”
• Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T))
  Lapidus, Standards in genomic sciences 2011
  • “...show high similarity to GldA, GldF and GldG of Bdellovibrio bacteriovorus HD100 (Bd1023, Bd1024 and Bd1025) [ 45 ]. The requirement of gldA for gliding motility was experimentally shown for Flavobacterium johnsoniae . A non-motile mutant lacking the intact gldA gene was complemented by a vector...”

LIC13314 conserved hypothetical protein from Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
Aligns to 174:434 / 675 (38.7%), covers 87.6% of PF09822, 65.2 bits

• Global proteome analysis of Leptospira interrogans
  Eshghi, Journal of proteome research 2009
  • “...of unknown function LIC10027 0.8951.138 1.2971.315 1.158 NS NS NS 1.158 Protein of unknown function LIC13314 NS NS NS 1.0441.063 1.0771.265 1.108 1.108 Protein of unknown function LA0268 NS NS NS 0.7961.329 0.6780.767 1.073 1.073 Protein of unknown function LIC11784 NS NS NS 0.8031.483 0.4050.542 1.571...”

Q04P78 ABC-type uncharacterized transport system domain-containing protein from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)
Aligns to 172:432 / 685 (38.1%), covers 87.6% of PF09822, 62.9 bits

• Proteomic dataset comparing strains of Leptospira borgpetersenii serovar Hardjo cultured at different temperatures
  Putz, Data in brief 2022
  • “...30.90 29.96 30.80 A0A1D7USI2 OmpA-like domain-containing protein 30.10 30.40 30.11 29.94 30.48 30.18 30.06 29.90 Q04P78 ABC_transp_aux domain-containing 30.44 30.65 30.00 30.34 29.33 30.19 29.71 30.40 Q04VX0 Isocitrate dehydrogenase [NADP] 29.33 29.66 29.93 30.54 30.28 30.51 30.16 30.57 Q04QD7 Electron transfer flavoprotein, beta subunit 29.90 30.09...”

XP_001692161 uncharacterized protein from Chlamydomonas reinhardtii
Aligns to 5:119 / 454 (25.3%), covers 45.1% of PF09822, 39.6 bits

• Intraflagellar transport protein IFT52 recruits IFT46 to the basal body and flagella.
  Lv, Journal of cell science 2017 (PubMed)
  • GeneRIF: These data suggest that IFT52 and IFT46 can preassemble as a complex in the cytoplasm, which is then targeted to basal bodies.
• Direct interactions of intraflagellar transport complex B proteins IFT88, IFT52, and IFT46.
  Lucker, The Journal of biological chemistry 2010
  • GeneRIF: analysis of interactions of intraflagellar transport complex B proteins IFT88, IFT52, and IFT46

TTHERM_00648910 intraflagellar transporter-like protein from Tetrahymena thermophila SB210
Aligns to 1:115 / 434 (26.5%), covers 42.1% of PF09822, 39.2 bits

• Composition and function of the C1b/C1f region in the ciliary central apparatus
  Joachimiak, Scientific reports 2021
  • “...40 48 8.0 0.6 32 5.3 0.7 39 6.5 1.5 2.47E-02 -1.91 1.81E-02 -1.55 IFT52 TTHERM_00648910 EAR84622.3 49 85 14.2 1.3 65 10.8 2.3 76 12.7 1.1 1.80E-04 -1.85 4.90E-04 -1.45 IFT54 TTHERM_01070330 EAS06586.1 50 76 12.7 1.2 48 8.0 1.4 62 10.3 0.7 3.00E-05 -2.25...”

IFT52_HUMAN / Q9Y366 Intraflagellar transport protein 52 homolog; Protein NGD5 homolog from Homo sapiens (Human) (see 5 papers)
NP_001290387 intraflagellar transport protein 52 homolog isoform 1 from Homo sapiens
NP_057088 intraflagellar transport protein 52 homolog isoform 1 from Homo sapiens
Aligns to 1:116 / 437 (26.5%), covers 40.2% of PF09822, 38.9 bits

• function: Involved in ciliogenesis as part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia (PubMed:27466190). Required for the anterograde transport of IFT88 (PubMed:27466190).
  subunit: Component of the IFT complex B, at least composed of IFT20, IFT22, IFT25, IFT27, IFT46, IFT52, TRAF3IP1/IFT54, IFT57, IFT74, IFT80, IFT81, and IFT88 (By similarity). Interacts with IFT88 (By similarity). Interacts with TTC25 (PubMed:25860617). Interacts with TTC21A (PubMed:30929735). Interacts with IFT70A1, IFT70A2, IFT70B and KIF17 (By similarity). Interacts with USH1G (PubMed:31637240).
• Defective airway intraflagellar transport underlies a combined motile and primary ciliopathy syndrome caused by IFT74 mutations.
  Fassad, Human molecular genetics 2023
  • “...3.22 3.70 1.35 Q9NQC8 IFT46 2.84 n.d. 2.89 n.d. -1.24 4.16 n.d. 5.59 n.d. 2.11 Q9Y366 IFT52 5.82 2.92 4.20 3.19 -2.53 8.87 4.34 3.35 2.46 2.03 A0AVF1 IFT56/TTC26 4.22 2.38 3.42 2.84 -1.72 9.39 3.54 3.70 3.71 2.69 Q9NWB7 IFT57 2.73 n.d. n.d. n.d. -0.94...”
• Gotta Go Slow: Two Evolutionarily Distinct Annelids Retain a Common Hedgehog Pathway Composition, Outlining Its Pan-Bilaterian Core
  Platova, International journal of molecular sciences 2022
  • “...+ x Human NP_001171172 IFT38/CLUAP1 ++ ? NP_608470 Human NP_055856 IFT52 ++ + NP_609045 Human NP_001290387 IFT54/TRAF3IP1 ++ + NP_650353 Human NP_056465 IFT56/TTC26 ++ + NP_650486 Human NP_001308671 IFT57 ++ + NP_608792 Human NP_060480 IFT80 ++ + NP_610064 Human NP_065851 IFT81 ++ + x Human NP_001137251...”
• Chlamydomonas IFT70/CrDYF-1 is a core component of IFT particle complex B and is required for flagellar assembly
  Fan, Molecular biology of the cell 2010
  • “...(62) AAL48848 (49) NP_001076767 (66) NP_064538 (72) IFT52 AAL12162 XP_827974 (56) NP_609045 (54) NP_741633 (58) NP_057088 (68) IFT80 ABQ96217 XP_827975 (60) NP_610064 (54) NP_508106 (58) NP_065851 (67) IFT172 XP_001691740 XP_822375 (60) NP_647700 (58) NP_510681 (55) NP_056477 (65) IFT20 AAM75748 XP_845450 (58) NP_724409 (51) NP_740843 (55) AAP50265...”

IFT52_MOUSE / Q62559 Intraflagellar transport protein 52 homolog; Protein NGD5 from Mus musculus (Mouse) (see 4 papers)
NP_001343451 intraflagellar transport protein 52 homolog from Mus musculus
NP_742162 intraflagellar transport protein 52 homolog from Mus musculus
Aligns to 1:116 / 426 (27.2%), covers 39.5% of PF09822, 36.4 bits

• function: Involved in ciliogenesis as part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia (PubMed:19253336). Required for the anterograde transport of IFT88 (By similarity).
  subunit: Component of the IFT complex B, at least composed of IFT20, IFT22, IFT25, IFT27, IFT46, IFT52, TRAF3IP1/IFT54, IFT57, IFT74, IFT80, IFT81, and IFT88 (PubMed:19253336). Interacts with IFT88 (PubMed:19253336). Interacts with TTC25 (PubMed:25860617). Interacts with TTC21A (By similarity). Interacts with IFT70A1, IFT70A2, IFT70B and KIF17 (PubMed:23810713). Interacts with USH1G (By similarity).
• The intraflagellar transport protein IFT52 associated with short-rib thoracic dysplasia is essential for ciliary function in osteogenic differentiation in vitro and for sensory perception in Drosophila.
  Guleria, Experimental cell research 2022 (PubMed)
  • GeneRIF: The intraflagellar transport protein IFT52 associated with short-rib thoracic dysplasia is essential for ciliary function in osteogenic differentiation in vitro and for sensory perception in Drosophila.
• Characterization of mouse IFT complex B
  Follit, Cell motility and the cytoskeleton 2009
  • “...Che-13 Hippi NP_082956 73716 Ift57 IFT57 48,641 JAF156 (N) Cilia + Cent IFT52 Osm-6 Ngd5 NP_742162 245866 Ift52 IFT52 48,117 FX23 (C) Cilia + Cent IFT46/FAP32 Dyf-6 NP_076320 76568 1500035H01 Rik IFT46 33,923 JAF161 (N) Cilia + Cent IFT27/FAP156 Not found NP_080207 67042 Rabl4 IFT27 20,683...”
• Brain Region-Specific nAChR and Associated Protein Abundance Alterations Following Chronic Nicotine and/or Menthol Exposure.
  Mulcahy, Journal of proteome research 2020
  • “...0.048 5 Gjc3 Q921C1 (5/6) 0.37 0.038 9 C8g Q8VCG4 (6/6) 0.34 0.017 2 Ift52 Q62559 (5/6) 0.33 0.022 6 Tmem243 B2RVB9 (6/6) 0.32 0.001 2 Stoml2 Q99JB2 (6/6) 0.32 0.020 16 Aktip Q64362 (6/6) 0.28 0.001 4 Cobl Q5NBX1 (5/6) 0.27 0.014 2 Zkscan3 Q91VW9...”

NPW32_RS11240 GldG family protein from Staphylococcus epidermidis
Aligns to 16:168 / 516 (29.7%), covers 35.3% of PF09822, 36.3 bits

• The first genomic characterization of a stable, hemin-dependent small colony variant strain of Staphylococcus epidermidis isolated from a prosthetic-joint infection
  Bogut, Frontiers in microbiology 2023
  • “...YhiN/ NAD(P)/FAD-dependent oxidoreductase NPW32_RS00235** clpP V24I, K52E, S138A, F175V, N218T, N227S, N228D Clp protease ClpP NPW32_RS11240 G430V Predicted extracellular nuclease/GldG family NPW32_RS03030 rlmH H158R (2nd aa from the C-terminus) 23S rRNA pseudouridine(1915)-N(3))-methyltransferase RlmH NPW32_RS10795 K76E, P125S, L152F Predicted N-acetyltransferase YhbS NPW32_RS06905*** T64I, A109V, S117F, L149F, L184M,...”

SERP_RS11260 Gldg family protein from Staphylococcus epidermidis RP62A
Aligns to 16:168 / 516 (29.7%), covers 35.0% of PF09822, 35.8 bits

• Identification of Genes Controlled by the Essential YycFG Two-Component System Reveals a Role for Biofilm Modulation in Staphylococcus epidermidis
  Xu, Frontiers in microbiology 2017
  • “...al., 2007 317 TGTAATTATTATGTTAA SERP_RS06410 Chorismate mutase Shikimate pathway Kloosterman et al., 2003 76 TGTAAAAAAACTGTTAA SERP_RS11260 Acetyl-CoA biotin carboxyl carrier Fatty acid metabolism 105 TGTTAAACTTTTGTTAT SERP_RS05210 rpsA 30s ribosomal protein S1 Protein production Agalarov et al., 2006 47 GTAACAAAGCATTTACA SERP_RS08380 tRNA-Leu-5 tRNAs Protein production SERP_RS08375 tRNA-Gly-5...”

Or search for genetic data about PF09822 in the Fitness Browser