PaperBLAST – Find papers about a protein or its homologs


Family Search for PF10065 (DUF2303)

PF10065.9 hits 7 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NMB0906 hypothetical protein (NCBI) from Neisseria meningitidis MC58
Aligns to 1:283 / 284 (99.6%), covers 99.3% of PF10065, 305.7 bits

YfdQ / b2360 CPS-53 (KpLE1) prophage; DUF2303 domain-containing protein YfdQ from Escherichia coli K-12 substr. MG1655 (see 2 papers)
P76513 Uncharacterized protein YfdQ from Escherichia coli (strain K12)
b2360 CPS-53 (KpLE1) prophage; predicted protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
Aligns to 6:272 / 274 (97.4%), covers 99.6% of PF10065, 298.9 bits

XF1649 conserved hypothetical protein (NCBI ptt file) from Xylella fastidiosa 9a5c
Aligns to 2:269 / 273 (98.2%), covers 100.0% of PF10065, 273.2 bits

STMMW_20261, STMUK_2022 DUF2303 family protein from Salmonella enterica subsp. enterica serovar Typhimurium str. D23580
Q8HAA2 Sb36 from Salmonella phage ST64B
Aligns to 9:273 / 275 (96.4%), covers 90.3% of PF10065, 251.7 bits

ROD_26241 hypothetical protein (RefSeq) from Citrobacter rodentium ICC168
Aligns to 10:273 / 275 (96.0%), covers 90.3% of PF10065, 247.9 bits

YP_002922683 hypothetical protein from Burkholderia virus Bcepil02
Aligns to 7:276 / 280 (96.4%), covers 98.9% of PF10065, 204.2 bits

YPK_1205 hypothetical protein (RefSeq) from Yersinia pseudotuberculosis YPIII
Aligns to 2:255 / 259 (98.1%), covers 90.6% of PF10065, 202.2 bits

Or search for genetic data about PF10065 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory