Family Search for PF10177 (DUF2371)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF10177 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

T200A_HUMAN / Q86VY9 Transmembrane protein 200A from Homo sapiens (Human) (see paper)
XP_005266873 transmembrane protein 200A isoform X1 from Homo sapiens
Aligns to 16:161 / 491 (29.7%), covers 100.0% of PF10177, 224.7 bits

• Proximity-Labeling Reveals Novel Host and Parasite Proteins at the Toxoplasma Parasitophorous Vacuole Membrane.
  Cygan, mBio 2021
  • “...Q14BN4 Sarcolemmal membrane-associated protein SLMAP 0.71 Q9UK41 Vacuolar protein sorting-associated protein 28 homolog VPS28 0.67 Q86VY9 Transmembrane protein 200A TMEM200A 0.67 P18850 Cyclic AMP-dependent transcription factor ATF-6 alpha ATF6 0.65 Q6UWP8 Suprabasin SBSN 0.64 O94822-3 Isoform 3 of E3 ubiquitin-protein ligase listerin LTN1 0.64 O75154-3 Isoform...”
• Phylogenetic analyses of human 1/2/8/20 paralogons suggest segmental duplications during animal evolution.
  Haq, 3 Biotech 2019
• TMEM200A is a potential prognostic biomarker and correlated with immune infiltrates in gastric cancer.
  Fang, PeerJ 2023
  • GeneRIF: TMEM200A is a potential prognostic biomarker and correlated with immune infiltrates in gastric cancer.

A6NKL6 Transmembrane protein 200C from Homo sapiens
Aligns to 14:201 / 621 (30.3%), covers 100.0% of PF10177, 205.6 bits

• Phylogenetic analyses of human 1/2/8/20 paralogons suggest segmental duplications during animal evolution.
  Haq, 3 Biotech 2019
• Evaluation of liver cirrhosis and hepatocellular carcinoma using Protein-Protein Interaction Networks.
  Ehsani, Gastroenterology and hepatology from bed to bench 2016
  • “...P02771 P02647 Transferrin receptor protein 1 ( 52 ) Transmembrane protein 200C(52) TFRC TMEM200C P02786 A6NKL6 Figure 1 This figure shows a PPI network, which consists of 651 nodes and 1305 edges for cirrhosis (a) and 2024 nodes and 3817edges for HCC (b). The highlighted nodes...”
• Quantitative proteomic analysis for high-throughput screening of differential glycoproteins in hepatocellular carcinoma serum
  Gao, Cancer biology & medicine 2015
  • “...MBrescia variant 8 3,460 3.57 1.56 P02786 Transferrin receptor protein 1 5 8 3.52 1.15 A6NKL6 Transmembrane protein 200C 1 6 3.45 1.29 B7Z461 Serine/threonine-protein kinase PCTAIRE-1 2 6 3.38 0.36 O75128 Protein cordon-bleu 1 2 3.34 0.69 P20061 Transcobalamin-1 1 5 3.29 0.14 P02042 Hemoglobin...”
  • “...2 OS=Homo sapiens GN=SYCP2 PE=2 SV=2 - [SYCP2_HUMAN] 0.85 1 1 1 1,530 175.5 8.85 A6NKL6 Transmembrane protein 200C OS=Homo sapiens GN=TMEM200C PE=2 SV=2 - [T200C_HUMAN] 1.13 1 1 1 621 63.9 10.08 Q6ZRN7 Putative uncharacterized protein FLJ46214 OS=Homo sapiens PE=2 SV=1 - [YP029_HUMAN] 7.21 1...”

Q69YZ2 Transmembrane protein 200B from Homo sapiens
Aligns to 14:148 / 307 (44.0%), covers 83.2% of PF10177, 93.6 bits

• Phylogenetic analyses of human 1/2/8/20 paralogons suggest segmental duplications during animal evolution.
  Haq, 3 Biotech 2019

LOC100535879, XP_003200240 uncharacterized protein LOC100535879 from Danio rerio
2 alignments in 2:116 / 227 (50.7%), covering up to 30.8% of PF10177, 52.7 bits

• High-throughput RNA sequencing reveals the effects of 2,2',4,4' -tetrabromodiphenyl ether on retina and bone development of zebrafish larvae
  Xu, BMC genomics 2015
  • “...14.227 LOC567550 XP_005162589 G2E3 0 down 0 13.437 aadacl4 NM_001172642 AADACL4 0 down 0 12.646 LOC100535879 XP_003200240 0 down 0 11.856 LOC796876 XP_001334272 CXorf21 0 down 0 11.856 pou5f1 NM_131112 POU3F3 0 down 0 11.856 zranb3 zranb3 ZRANB3 0 down 0 10.275 LOC566574 XP_001919203 GIMAP7 0...”
  • “...LOC567550 XP_005162589 G2E3 0 down 0 13.437 aadacl4 NM_001172642 AADACL4 0 down 0 12.646 LOC100535879 XP_003200240 0 down 0 11.856 LOC796876 XP_001334272 CXorf21 0 down 0 11.856 pou5f1 NM_131112 POU3F3 0 down 0 11.856 zranb3 zranb3 ZRANB3 0 down 0 10.275 LOC566574 XP_001919203 GIMAP7 0 down...”

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