Family Search for PF10209 (DUF2340)

PF10209 hits 2 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

AIM29_YEAST / P36154 Altered inheritance rate of mitochondria protein 29 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
YKR074W Aim29p from Saccharomyces cerevisiae
Aligns to 34:155 / 155 (78.7%), covers 100.0% of PF10209, 182.7 bits

• function: May be involved in mitochondrial organization and biogenesis
• The genomic landscape of transposable elements in yeast hybrids is shaped by structural variation and genotype-specific modulation of transposition rate
  Hénault, eLife 2024
  • “...(CC1). ( B ) De novo Ty1 insertion (narrow box) into the host gene AIM29 (YKR074W, wide box) in the LL2011_009 ( SpC ) subgenome of MA line L41 (CC3). We asked whether the de novo Ty1 insertions were associated with specific subfamilies from the parental...”
• Genome-wide identification of resistance genes and transcriptome regulation in yeast to accommodate ammonium toxicity
  Fu, BMC genomics 2022
  • “...VPS51 0.4114 0.00002 0.5171 0.00008 0.4268 0.00019 YKR042W UTH1 0.3739 0 0.5003 0.00002 0.5051 0.00001 YKR074W AIM29 0.3547 0 0.2324 0 0.3205 0.00001 YLR113W HOG1 0.6609 0.00002 0.7480 0.00001 0.7253 0 YLR337C VRP1 0.4252 0.00001 0.4744 0.00007 0.5412 0.00001 YML008C ERG6 0.2919 0.00004 0.3039 0.00008 0.3965...”
• Finding friends and enemies in an enemies-only network: a graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions
  Qi, Genome research 2008
  • “...the above-mentioned processes. Products of two uncharacterized ORFs, YKR074W and NCS2, and one protein with unknown function, Chs7, are predicted to be part of...”
• Large-scale analysis of yeast filamentous growth by systematic gene disruption and overexpression
  Jin, Molecular biology of the cell 2008
  • “...genes were identified by gene overexpression; two genes (YKR074w and YNL260c) were identified in both screens. For comparison, we also include here several...”
• The proteome response to amyloid protein expression in vivo
  Gomes, PloS one 2012
  • “...429 4 AIM29 Altered inheritance rate of mitochondria protein 29 1.4 8.26E-03 1.4 1.29E-02 U P36154 1453 121 76 2 ALF Fructose-bisphosphatealdolase +1.3 5.18E-03 CM P14540 1035 221 130 3 ALF Fructose-bisphosphatealdolase +1.3 1.85E-02 CM P14540 1131 277 168 3 ATPA ATP synthase subunit alpha, mitochondrial...”

NP_001309261 UPF0538 protein C2orf76 isoform 2 from Homo sapiens
2 alignments in 8:109 / 109 (93.6%), covering up to 56.7% of PF10209, 117.9 bits

• Host determinants of HIV-1 control in African Americans.
  Pelak, The Journal of infectious diseases 2010
  • GeneRIF: Observational study and genome-wide association study of gene-disease association. (HuGE Navigator)
• Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
  Rose, Molecular medicine (Cambridge, Mass.)
  • GeneRIF: Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)

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