PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF10354 (DUF2431)

PF10354.9 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BMT5_SCHPO / O94480 25S rRNA (uridine-N(3))-methyltransferase; EC 2.1.1.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
Aligns to 61:226 / 282 (58.9%), covers 100.0% of PF10354, 187.7 bits

BMT5_YEAST / P40493 25S rRNA (uridine(2634)-N(3))-methyltransferase; Base methyltransferase of 25S RNA 5; EC 2.1.1.313 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
P40493 25S rRNA (uracil2634-N3)-methyltransferase (EC 2.1.1.313) from Saccharomyces cerevisiae (see paper)
BMT5 / P40493 25S rRNA (uracil2634-N3)-methyltransferase (EC 2.1.1.313) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see paper)
YIL096C Putative protein of unknown function; associates with precursors of the 60S ribosomal subunit (RefSeq) from Saccharomyces cerevisiae
NP_012170 25S rRNA (uracil2634-N3)-methyltransferase from Saccharomyces cerevisiae S288C
Aligns to 75:292 / 336 (64.9%), covers 99.4% of PF10354, 177.2 bits

AT1G55790 ATP binding / nucleotide binding / phenylalanine-tRNA ligase (RefSeq) from Arabidopsis thaliana
Aligns to 31:196 / 414 (40.1%), covers 100.0% of PF10354, 164.9 bits

AT4G26485 methyltransferase small domain protein from Arabidopsis thaliana
Aligns to 18:185 / 209 (80.4%), covers 99.4% of PF10354, 156.2 bits

NP_941077 ferredoxin-fold anticodon-binding domain-containing protein 1 homolog from Mus musculus
Aligns to 7:176 / 622 (27.3%), covers 99.4% of PF10354, 143.8 bits

AT4G26480 KH domain-containing protein (RefSeq) from Arabidopsis thaliana
Aligns to 1:147 / 555 (26.5%), covers 86.9% of PF10354, 125.0 bits

AT1G55803 ferredoxin-fold anticodon-binding domain protein from Arabidopsis thaliana
Aligns to 29:127 / 127 (78.0%), covers 57.7% of PF10354, 99.1 bits

AT1G55800 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 29:183 / 314 (49.4%), covers 73.2% of PF10354, 91.2 bits

Or search for genetic data about PF10354 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory