Family Search for PF10678 (DUF2492)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF10678 hits 5 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

ECs2614 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 2:78 / 79 (97.5%), covers 98.7% of PF10678, 124.7 bits

• Gene expression induced in Escherichia coli O157:H7 upon exposure to model apple juice
  Bergholz, Applied and environmental microbiology 2009
  • “...ECs2449 ECs2505 ECs2506 ECs2536 ECs2544 ECs2558 ECs2581 ECs2614 ECs2622 ECs2623 ECs2692 ECs2714 ECs2737 ECs2758 ECs2759 ECs2987 ECs3105 ECs3264 ECs3267 ECs3270...”
• Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium
  Bergholz, BMC microbiology 2007
  • “...ECs2457 ydjY orf, hypothetical protein 2.03 6 ECs2463 ynjE putative thiosulfate sulfur transferase 3.47 1 ECs2614 yecH orf, hypothetical protein 3.09 6 ECs3061 fruB PTS system, fructose-specific IIA/fpr component 2.02 1 ECs3084 dsbE disulfide oxidoreductase 2.04 1 ECs3088 ccmC heme exporter protein C 2.19 1 ECs3090...”
  • “...araF 3.61 2 ECs2126 tam 2.83 2 ECs2613 ftn -3.88 1 ECs2145 ydeI 3.74 2 ECs2614 yecH -2.94 6 ECs2146 ydeJ 2.05 2 ECs2668 yedE -2.15 1 ECs2150 ydfZ -5.10 4 ECs2669 yedF -2.78 1 ECs2281 O157 2.30 2 ECs2670 yedK 2.55 2 ECs2292 - 3.22...”

YecH / b1906 DUF2492 domain-containing protein YecH from Escherichia coli K-12 substr. MG1655
b1906 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 2:78 / 79 (97.5%), covers 98.7% of PF10678, 124.3 bits

• 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
  , Haematologica 2013
• Role of the rapA gene in controlling antibiotic resistance of Escherichia coli biofilms
  Lynch, Antimicrobial agents and chemotherapy 2007
  • “...b1342 c2754 ydaN Ada b1171 b2999 b3239 b3448 b1906 ymgD yghX yhcO yhhA yecH Enterochelin esterase Hypothetical protein Hypothetical protein; possible hemin...”

SG1117 hypothetical protein from Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91
STM1936 putative cytoplasmic protein from Salmonella typhimurium LT2
Aligns to 2:78 / 79 (97.5%), covers 98.7% of PF10678, 122.5 bits

• ABC transporters involved in export of cell surface glycoconjugates
  Cuthbertson, Microbiology and molecular biology reviews : MMBR 2010
  • “...Nmul_A2398 PA5450 PP_1779 PputW619_1387 PSPTO_1075 RoseRS_4089 SG1117 SSKA14_2119 Suden_1731 A33_0258 B100 Wzt AAK53481 428 Gammaproteobacteria BXO8 MAFF 311018...”
• Adrenaline modulates the global transcriptional profile of Salmonella revealing a role in the antimicrobial peptide and oxidative stress resistance responses
  Karavolos, BMC genomics 2008
  • “...B resistance 0.6 STM3216 putative methyl-accepting chemotaxis protein II, aspartate sensor receptor 0.7 Function unknown STM1936, yecH putative cytoplasmic protein 0.5 STM4293, yjdB putative integral membrane protein 0.6 STM2300, pmrJ cytoplasmic protein 0.6 C Microarray Validation Fold change KEGG annotation Product Microarrays qPCR STM0191, fhuA outer...”

BT_RS05775 YecH family metal-binding protein from Bacteroides thetaiotaomicron VPI-5482
Aligns to 2:76 / 77 (97.4%), covers 98.7% of PF10678, 106.1 bits

• Iron Deficiency Modulates Metabolic Landscape of Bacteroidetes Promoting Its Resilience during Inflammation
  Lewis, Microbiology spectrum 2023
  • “...DUF4251 domain-containing protein 7.6 0.175 BT_RS05720 BT1133 Sigma-70 family RNA polymerase sigma factor 4.0 0.003 BT_RS05775 BT1143 YecH family protein 4.2 0.353 BT_RS05900 BT1168 N -acetylmuramoyl- l -alanine amidase 2.5 0.26 BT_RS06405 BT1269 Efflux RND transporter periplasmic adaptor subunit 5.0 to 3.1 4E-05 to 0.001 BT_RS06435...”

BT1143 conserved hypothetical protein from Bacteroides thetaiotaomicron VPI-5482
Aligns to 1:65 / 66 (98.5%), covers 87.0% of PF10678, 85.2 bits

• Iron Deficiency Modulates Metabolic Landscape of Bacteroidetes Promoting Its Resilience during Inflammation
  Lewis, Microbiology spectrum 2023
  • “...domain-containing protein 7.6 0.175 BT_RS05720 BT1133 Sigma-70 family RNA polymerase sigma factor 4.0 0.003 BT_RS05775 BT1143 YecH family protein 4.2 0.353 BT_RS05900 BT1168 N -acetylmuramoyl- l -alanine amidase 2.5 0.26 BT_RS06405 BT1269 Efflux RND transporter periplasmic adaptor subunit 5.0 to 3.1 4E-05 to 0.001 BT_RS06435 to...”

Or search for genetic data about PF10678 in the Fitness Browser