Family Search for PF10696 (DUF2501)

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PF10696 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YPTB0546 putative glycoprotein/receptor from Yersinia pseudotuberculosis IP 32953
YPO0406 putative exported protein from Yersinia pestis CO92
YPK_3656 hypothetical protein from Yersinia pseudotuberculosis YPIII
Aligns to 82:160 / 163 (48.5%), covers 100.0% of PF10696, 101.5 bits

• IscR is essential for yersinia pseudotuberculosis type III secretion and virulence
  Miller, PLoS pathogens 2014
  • “...YPTB0402 aspartate ammonia-lyase aspA 3.1 YPTB0456 fructose-1, 6-bisphosphatase fbp 2.1 YPTB0460 malate dehydrogenase mdh 2.1 YPTB0546 putative glycoprotein/receptor 2.0 YPTB0755 enolase eno 2.1 YPTB0809 probable cytochrome b(561) cybB 4.0 YPTB0810 putative cytochrome b(562) cybC 6.7 YPTB1117 putative N-acetylglucosamine regulatory protein nagC 2.5 YPTB1118 N-acetylglucosamine-6-phosphate deacetylase nagA...”
• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...2 (< 0.001) YPTB0499 YPO3474 hypothetical protein 1.509 (0.036) YPTB0505 YPO3468 hypothetical protein 1.632 (0.026) YPTB0546 YPO0406 putative exported protein 2.397 (< 0.001) YPTB0560 or0394 hypothetical protein 1.636 (0.028) 0.271 (< 0.001) YPTB0593 YPO0450 putative membrane protein 0.736 (0.025) 1.464 (0.007) YPTB0651 YPO0511 hypothetical protein 0.576...”
• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...(< 0.001) YPTB0499 YPO3474 hypothetical protein 1.509 (0.036) YPTB0505 YPO3468 hypothetical protein 1.632 (0.026) YPTB0546 YPO0406 putative exported protein 2.397 (< 0.001) YPTB0560 or0394 hypothetical protein 1.636 (0.028) 0.271 (< 0.001) YPTB0593 YPO0450 putative membrane protein 0.736 (0.025) 1.464 (0.007) YPTB0651 YPO0511 hypothetical protein 0.576 (0.02)...”
• Identification of MrtAB, an ABC transporter specifically required for Yersinia pseudotuberculosis to colonize the mesenteric lymph nodes
  Crimmins, PLoS pathogens 2012
  • “...#1 and #2 Hypothetical 5.20E-02 (2.63) 1.05 (0.2) YPK_2406 #1 Hypothetical 0 (NA) 1.75 (1.28) YPK_3656 #1 Hypothetical 0 (NA) 0.78 (0.45) YPK_0453 #1 tRNA synthase 1.73E-04 (5.98) 1.59 (1.08) YPK_0688 #1 Hypothetical 4.46E-04 (5.17) ND YPK_2424 #1 flgC 8.56E-03 (2.67) 2.26 (1.83) YPK_3600 #1 Hypothetical...”

YjjA / b4360 DUF2501 domain-containing protein YjjA from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b4360 putative glycoprotein/receptor from Escherichia coli str. K-12 substr. MG1655
Aligns to 84:162 / 164 (48.2%), covers 100.0% of PF10696, 99.4 bits

• Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses
  King, Applied and environmental microbiology 2010
  • “...b1063 b1110 b2528 b3083 b3293 b4140 b4173 b4360 Inorganic ion transport and metabolism Defense mechanisms Carbohydrate transport and metabolism Carbohydrate...”

ECs5320 putative glycoprotein/receptor from Escherichia coli O157:H7 str. Sakai
Aligns to 85:163 / 165 (47.9%), covers 100.0% of PF10696, 97.2 bits

• Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses
  King, Applied and environmental microbiology 2010
  • “...ECs0771 ECs1441 ECs1488 ECs3394 ECs3965 ECs4158 ECs5121 ECs5149 ECs5320 b0736 b1063 b1110 b2528 b3083 b3293 b4140 b4173 b4360 Inorganic ion transport and...”

BCAL1833 hypothetical protein from Burkholderia cenocepacia J2315
Aligns to 84:161 / 162 (48.1%), covers 100.0% of PF10696, 79.9 bits

• Transcriptional response of Burkholderia cenocepacia J2315 sessile cells to treatments with high doses of hydrogen peroxide and sodium hypochlorite
  Peeters, BMC genomics 2010
  • “...increased expression of acnA (BCAM0961) was observed, while the number of mRNA transcripts of acnB (BCAL1833) increased both in the H 2 O 2 - and in the NaOCl-treated biofilms; the data obtained for the H 2 O 2 -treated biofilms were confirmed by qPCR (Table...”

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