Family Search for PF10736 (DUF2527)

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PF10736 hits 2 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YobF / b1824 DUF2527 domain-containing protein YobF from Escherichia coli K-12 substr. MG1655 (see 6 papers)
YOBF_ECOLI / P64508 Protein YobF from Escherichia coli (strain K12) (see 2 papers)
b1824 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
c2232 Hypothetical protein yobF from Escherichia coli CFT073
Aligns to 1:38 / 47 (80.9%), covers 100.0% of PF10736, 105.0 bits

• Effects of Kasugamycin on the Translatome of Escherichia coli
  Lange, PloS one 2017
  • “...GCT GG T GG b2765 sscR 0,37 24 24 4 no T GTA GAG A b1824 yobF 0,39 27 27 5 no TA CA G TTC b2412 zipA 0,40 47 47 6 no C AA CAGA G b3357 crp 0,45 166 166 7 yes AG AGGA...”
• 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
  , Haematologica 2013
• Evolutionary dynamics of small RNAs in 27 Escherichia coli and Shigella genomes
  Skippington, Genome biology and evolution 2012
  • “...dsrA, arcZ, rprA 22 Variable Congruent No fhlA b2731 oxyS 24 Variable Incongruent No yobF b1824 oxyS 18 Variable Congruent No yhiM b3491 oxyS 19 Variable Incongruent No gadB b1493 oxyS 27 Core Incongruent No uhpT b3666 oxyS 27 Core Incongruent No wrbA b1004 oxyS 21...”
• Global gene expression profiling of the asymptomatic bacteriuria Escherichia coli strain 83972 in the human urinary tract
  Roos, Infection and immunity 2006
  • “...b1779 b3342 b3186 b3307 b4000 b0755 b3340 b3321 b1824 b3316 50S ribosomal subunit protein L5 5S rRNA Small toxic membrane polypeptide 50S ribosomal subunit...”
• Sulfur and nitrogen limitation in Escherichia coli K-12: specific homeostatic responses
  Gyaneshwar, Journal of bacteriology 2005
  • “...clusteringb Hierarchical clusteringc Numerical analysisd b1287 b1729 b1823 b1824 b2012 b2013 b0801 b1654 b3207 b4135 b4136 a All ORFs were readily identified by...”
  • “...to be members of their operons (b1287, b1729, b1823, b1824, b2012, and b2013) (Tables 1 and 3). The perti- Downloaded from http://jb.asm.org/ on February 11,...”
• High-density microarray-mediated gene expression profiling of Escherichia coli
  Wei, Journal of bacteriology 2001
  • “...b0250, b0269, b0271, b0291, b0322, b0574, b1437, b1595, b1824, b1978, b2067, b2086, b2088, b2097, b2270, b2292, b2630, b2641, b2851, b2878, b3194, b3596, b3597,...”
• Transposon-Sequencing Analysis Unveils Novel Genes Involved in the Generation of Persister Cells in Uropathogenic Escherichia coli
  Molina-Quiroz, Antimicrobial agents and chemotherapy 2016
  • “...c1888 c1925 c1927 c1945 c1956 c2004 c2034 c2144 c2199 c2232 c2377 c2385 c2465 c2471 c2475 c2615 c2677 c2702 c2841 c3028 c3174 c3255 c3721 c3888 c4475 c4704...”
• In vivo gene expression analysis identifies genes required for enhanced colonization of the mouse urinary tract by uropathogenic Escherichia coli strain CFT073 dsdA
  Haugen, Infection and immunity 2007
  • “...c0707 c2901 c4799 c2564 c2563 c0243 c4361 c0579 c4967 c2232 c4830 c4038 c2566 c2231 c3203 c4798 c2291 c4228 Gene VOL. 75, 2007 FACTORS NECESSARY FOR UTI...”

STM1838 putative cytoplasmic protein from Salmonella typhimurium LT2
Aligns to 1:38 / 47 (80.9%), covers 100.0% of PF10736, 101.8 bits

• aro mutations in Salmonella enterica cause defects in cell wall and outer membrane integrity
  Sebkova, Journal of bacteriology 2008
  • “...PSLT097 PSLT064 PSLT099 PSLT005 PSLT106 STM0159 STM1018 STM1838 STM0831 STM1012 STM2796 STM3656 Log2 fold induction Log2 fold suppression Downregulated in aroD...”

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