Family Search for PF10749 (DUF2534)

PF10749 hits 1 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YnaJ / b1332 DUF2534 domain-containing protein YnaJ from Escherichia coli K-12 substr. MG1655
b1332 predicted inner membrane protein from Escherichia coli str. K-12 substr. MG1655
c1805 Hypothetical protein ynaJ from Escherichia coli CFT073
Z2436 orf, hypothetical protein from Escherichia coli O157:H7 EDL933
Aligns to 4:83 / 85 (94.1%), covers 97.5% of PF10749, 139.4 bits

• Medium-Chain-Length Fatty Acid Catabolism in Cupriavidus necator H16: Transcriptome Sequencing Reveals Differences from Long-Chain-Length Fatty Acid β-Oxidation and Involvement of Several Homologous Genes
  Strittmatter, Applied and environmental microbiology 2023 (secret)
• 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
  , Haematologica 2013
• Genome-wide transcriptional responses of Escherichia coli K-12 to continuous osmotic and heat stresses
  Gunasekera, Journal of bacteriology 2008
  • “...51), and with the exception of the fnr region (b1332 to b1344), galactitol operon (b2096 to b2090), and flagellar genes, it shows a gene expression profile...”
• An evaluation of Comparative Genome Sequencing (CGS) by comparing two previously-sequenced bacterial genomes
  Herring, BMC genomics 2007
  • “...yes ROI new 4304907 alsK b4084 IS5 insertion yes ROI known Deletions/Inversions 1395267 1397616 ynaJ-fnr b1332 1334 deletion yes ROI new ~2556721 2563354 intZ-yffS b2442 2450 deletion yes ROI known 3424826 4207943 b3276 4008 Inversion undetected known 1. Location is given based on the MG1655 genome...”
• Genome-wide localization of mobile elements: experimental, statistical and biological considerations
  Martinez-Vaz, BMC genomics 2005
  • “...b0555, b0556 3. gltL, gltK, gltJ, ybeJ, yi52_3 , b0658 4. b1328, b1329, b1330, yi52_4, b1332, fnr 5. b1361, b1362, trkG, b1368, yi52_5, b1371, b1372, b1374 6. motB, motA, flhC, flhD, yecG, otsA, otsB 7. nac, cobT, cobs, cobU, yi52_6, b1995, yi22_3 8. b2028, gnd, yi52_7,...”
  • “..., b0555 3. gltK, gltJ, ybeJ, yi52_3 4. pspB, pspC, pspD 5. b1330, yi52_4 , b1332, ydaA, fnr 6. b1368, yi52_5, b1371, b1372 7. cobs, cobU, yi52_6, yi22_3 8. gnd, yi52_7 , yefJ, yefI 9. yejO, b2191, yi52_8, ccmH 10. glcC, b2981, yi52_9, b2983, pitB 11....”
• Physiological studies of Escherichia coli strain MG1655: growth defects and apparent cross-regulation of gene expression
  Soupene, Journal of bacteriology 2003
  • “...b1346 from CGSC 6300. No products were detected for b1332 through b1344. The entire fnr region was amplified by long-range PCR according to the manufacturer's...”
  • “...the right. The genes deleted in the CGSC isolate (b1332 to b1344) are, respectively, ynaJ (open reading frame conserved in E. coli and Salmonella enterica),...”
• The 14-kDa dynein light chain-family protein Dlc1 is required for regular oscillatory nuclear movement and efficient recombination during meiotic prophase in fission yeast
  Miki, Molecular biology of the cell 2002
  • “...al., 1993), we cloned the dlc1 gene (from cosmid c1805) and the dlc2 gene (c926). A HincII-SpeI fragment containing the dlc1 gene was subcloned into the...”
• Genome-wide transposon mutagenesis reveals a role for pO157 genes in biofilm development in Escherichia coli O157:H7 EDL933
  Puttamreddy, Infection and immunity 2010
  • “...Z2256b Z5890b L7020d Z3635 Z3182b Z4625 Z0472 Z1555b Z2436 Z1921c Z0151 Z1456c/Z1457c Z3592 Z2026 L7049d Z3497 b Z4099 Z5049 Z3199b/Z3200b Z5050b Z2163...”

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