Family Search for PF10762 (DUF2583)

PF10762 hits 7 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YchH / b1205 stress-induced protein from Escherichia coli K-12 substr. MG1655 (see 3 papers)
ECs1710 hypothetical protein from Escherichia coli O157:H7 str. Sakai
b1205 predicted inner membrane protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:88 / 92 (95.7%), covers 98.9% of PF10762, 158.0 bits

• Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium
  Bergholz, BMC microbiology 2007
  • “...O157 -2.53 1 ECs0191 yaeO 2.42 2 ECs1684 dadA 2.34 2 ECs0207 dniR -2.11 1 ECs1710 ychH 4.61 2 ECs0334 O157 -2.07 1 ECs1712 prsA -2.68 1 ECs0374 O157 2.42 2 ECs1859 rnb -2.70 1 ECs0401 mhpR 4.33 3 ECs1954 O157 -2.61 1 ECs0416 O157 3.55...”
• Biphasic inflammation control by dedifferentiated fibroblasts enables axon regeneration after spinal cord injury in zebrafish
  John, 2025
• 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
  , Haematologica 2013
• Reconfiguring the quorum-sensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones
  Lee, Applied and environmental microbiology 2009
  • “...b0486 b0545 b0707 b0753 b0773 b0824 b0865 b0897 b1188 b1205 b1256 b1269 b1375 b1376 b1406 b1423 b1440 b1441 b1442 b1443 b1444 b1470 b1487 b1536 b1629 b1690...”
• Prominent roles of the NorR and Fur regulators in the Escherichia coli transcriptional response to reactive nitrogen species
  Mukhopadhyay, Proceedings of the National Academy of Sciences of the United States of America 2004
  • “...b2552 b4209 b4062 b2597 b0585 b3547 b2673 b2674 b0445 b1205 b3327 b2732 b3117 b1895 b2717 b0795 b1684 b0127 b4367 b2875 b3106 b4357 b2579 b0484 b3744 b4381...”
• Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation
  Selinger, Genome research 2003
  • “...b3914 b0990 b3913 b0553 b2398 b3494 b3556 b3685 b0726 b1205 b3362 b0162 b1060 b2080 b2377 b3361 b4132 b4396 yjfN IldD cpxP(2) cspG cpxP(1) nmpC yfeC uspB cspA...”
• Combined, functional genomic-biochemical approach to intermediary metabolism: interaction of acivicin, a glutamine amidotransferase inhibitor, with Escherichia coli K-12
  Smulski, Journal of bacteriology 2001
  • “...b1107 b1108 b1111 b1112 b1128 b1145 b1168 b1178 b1195 b1205 b1256 b1257 b1273 b1285 b1321 b1333 b1376 b1378 b1414 b1446 b1454 b1586 b1598 b1667 b1678 b1725...”

OA04_21530 stress-induced protein YchH from Pectobacterium versatile
Aligns to 1:88 / 89 (98.9%), covers 100.0% of PF10762, 154.9 bits

• The PhoPQ Two-Component System Is the Major Regulator of Cell Surface Properties, Stress Responses and Plant-Derived Substrate Utilisation During Development of Pectobacterium versatile-Host Plant Pathosystems
  Kravchenko, Frontiers in microbiology 2020
  • “...Periplasmic FAD:protein FMN transferase TTTTTTTCCTTTCATTTGT 10.3 slyB OA04_18750 2.46 Outer membrane lipoprotein CTGTTTATACGCAATTTAA 9.9 ychH OA04_21530 2.31 Putative inner membrane stress-induced protein AATATTTTTTTACGTTTAA 6 ynfK OA04_22140 5.06 Putative dithiobiotin synthetase CATTTTAGCTGTGCTTGTT 5.7 OA04_23860 3.76 hypothetical protein GGGTATTAATCTTGTTTAA 7.3 OA04_24930 2.36 Protein kinase-like domain protein ATATTTGATCTGCGTTGAA 5.4...”

ECA2185 putative membrane protein from Erwinia carotovora subsp. atroseptica SCRI1043
ECA2185 stress-induced protein YchH from Pectobacterium atrosepticum SCRI1043
Aligns to 1:88 / 89 (98.9%), covers 100.0% of PF10762, 154.4 bits

• RpoS-Regulated Genes and Phenotypes in the Phytopathogenic Bacterium Pectobacterium atrosepticum
  Petrova, International journal of molecular sciences 2023
  • “...universal stress protein UspA (ECA0050), envelope stress response membrane protein PspB (ECA1984), stress-induced protein YchH (ECA2185), stress response protein ElaB (ECA3015), entericidin A/B family lipoprotein EcnB (ECA3975), and periplasmic chaperone OsmY (ECA0469) ( Table S2 ). Overall, genes with presumed direct transcriptional control via RpoS (...”

EAE_16700 stress-induced protein YchH from Klebsiella aerogenes KCTC 2190
Aligns to 1:88 / 91 (96.7%), covers 100.0% of PF10762, 153.2 bits

• Transcriptional effects of melatonin on the gut commensal bacterium Klebsiella aerogenes
  Graniczkowska, Genomics 2022
  • “...UspB Universal stress protein B exponential 1.98 EAE_05775 UspA Universal stress protein A exponential 1.57 EAE_16700 YchH stress response protein exponential 2.90 EAE_18855 lipoprotein response to oxidative stress exponential 2.07 EAE_01045 RaiA translation inhibitor protein exponential 4.33 Novel00008 RaiA translation inhibitor protein exponential 5.64 EAE_10730 DnaK...”

YPO2012 putative membrane protein from Yersinia pestis CO92
YPTB2000 tRNA-Asn from Yersinia pseudotuberculosis IP 32953
Aligns to 1:89 / 90 (98.9%), covers 98.9% of PF10762, 142.3 bits

• RNA-Sequencing Reveals the Progression of Phage-Host Interactions between φR1-37 and Yersinia enterocolitica
  Leskinen, Viruses 2016
  • “...Outer membrane protein X 1.70 Y11_23901 Conserved putative membrane protein 2.12 Y11_12601 Putative membrane protein YPO2012 2.27 Transporters Y11_29791 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS 5.33 Y11_38431 Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA) 4.72 Y11_14731 Mg(2+) transport ATPase protein C 3.63 Y11_29801 Phosphate transport system...”
• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...(0.039) YPTB1987 YPO1995 hypothetical protein 0.57 (0.047) YPTB1996 YPO2004 putative membrane protein 2.041 (0.002) YPTB2000 YPO2012 putative membrane protein 0.256 (< 0.001) YPTB2092 YPO2166 putative exported protein 0.671 (0.027) YPTB2114 YPO2191 hypothetical protein 0.28 (< 0.001) YPTB2148 YPO2226 hypothetical protein 1.855 (0.007) YPTB2151 (osmB) YPO2229 osmotically...”
• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...0.649 (0.039) YPTB1987 YPO1995 hypothetical protein 0.57 (0.047) YPTB1996 YPO2004 putative membrane protein 2.041 (0.002) YPTB2000 YPO2012 putative membrane protein 0.256 (< 0.001) YPTB2092 YPO2166 putative exported protein 0.671 (0.027) YPTB2114 YPO2191 hypothetical protein 0.28 (< 0.001) YPTB2148 YPO2226 hypothetical protein 1.855 (0.007) YPTB2151 (osmB) YPO2229...”

Y11_12601 stress-induced protein YchH from Yersinia enterocolitica subsp. palearctica Y11
Aligns to 1:88 / 90 (97.8%), covers 98.9% of PF10762, 142.3 bits

• RNA-Sequencing Reveals the Progression of Phage-Host Interactions between φR1-37 and Yersinia enterocolitica
  Leskinen, Viruses 2016
  • “...PerM (=YfgO) 1.98 Y11_17401 Outer membrane protein X 1.70 Y11_23901 Conserved putative membrane protein 2.12 Y11_12601 Putative membrane protein YPO2012 2.27 Transporters Y11_29791 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS 5.33 Y11_38431 Na(+)/H(+) antiporter NhaA (Sodium/proton antiporter NhaA) 4.72 Y11_14731 Mg(2+) transport ATPase protein C 3.63...”

PMI_RS05240 stress-induced protein YchH from Proteus mirabilis HI4320
Aligns to 1:88 / 92 (95.7%), covers 98.9% of PF10762, 134.5 bits

• Decreased biofilm formation in Proteus mirabilis after short-term exposure to a simulated microgravity environment
  Wang, Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] 2021
  • “...1.77700473582651 Down 0.00015 Murein lipoprotein PMI_RS05420 519 1.5049377019371 Down 1.91E-05 Secretion system secreted protein Hcp PMI_RS05240 ychH 279 2.48872258916291 Down 7.89E-07 No PMI_RS14300 pstS 1041 1.88909737452914 Down 0.00025 Phosphate transport system substrate-binding protein PMI_RS03690 519 1.50265019782485 Down 8.69E-05 Type VI secretion system secreted protein Hcp mRNA...”

Or search for genetic data about PF10762 in the Fitness Browser