Family Search for PF10769 (DUF2594)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF10769 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Q7CQB7 Cytoplasmic protein from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
SC1953 putative cytoplasmic protein from Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Aligns to 1:74 / 74 (100.0%), covers 100.0% of PF10769, 137.4 bits

• N-dodecanoyl-homoserine lactone influences the levels of thiol and proteins related to oxidation-reduction process in Salmonella
  de, PloS one 2018
  • “...ydfZ Unclassified -1.164 1.244 0.884 2.134 0.262 2.329 -0.047 0.221 -0.048 0.063 Putative cytoplasmic protein Q7CQB7 yecF Unclassified -9.069 0.706 ND ND ND ND ND ND 6.772 1.342 UPF0265 protein YeeX P67605 yeeX Unclassified -12.867 2.813 10.455 1.629 1.293 0.890 -0.540 0.696 8.884 1.714 Putative cytoplasmic...”
• Use of pulsed field gel electrophoresis and transposon mutagenesis to estimate the minimal number of genes required for motility in Caulobacter crescentus
  Ely, Genetics 1989
  • “...@ ~ N 6 0 3 )SCl135 , (flbG602),SCl166 ( f l ~ - 6 0 9 )SC1953 , (fl~-619), SC1967 ( J ~ - 6 2 0 )SC2190 , ( f l ~ - 6 2 7 )SC2208 , (Ja-655), SC2249 ( f l ~ -...”

YPO1864 conserved hypothetical protein from Yersinia pestis CO92
YPTB1734 hypothetical protein from Yersinia pseudotuberculosis IP 32953
Aligns to 1:74 / 74 (100.0%), covers 100.0% of PF10769, 130.5 bits

• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...YPTB1705 putative phage minor tail protein 1.794 (0.002) YPTB1722 YPO1850 hypothetical protein 1.593 (0.045) YPTB1734 YPO1864 conserved hypothetical protein 0.679 (0.003) YPTB1752 or4178 O protein [Enterobacteria phage 186] gb|AAC34159.1| (U32222)... 0.49 (0.01) YPTB1785 or4145 hypothetical protein 0.453 (< 0.001) YPTB1786 or4144 hypothetical protein 1.605 (0.042) YPTB1798...”
• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...YPTB1705 YPTB1705 putative phage minor tail protein 1.794 (0.002) YPTB1722 YPO1850 hypothetical protein 1.593 (0.045) YPTB1734 YPO1864 conserved hypothetical protein 0.679 (0.003) YPTB1752 or4178 O protein [Enterobacteria phage 186] gb|AAC34159.1| (U32222)... 0.49 (0.01) YPTB1785 or4145 hypothetical protein 0.453 (< 0.001) YPTB1786 or4144 hypothetical protein 1.605 (0.042)...”

YecF / b1915 DUF2594 domain-containing protein YecF from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b1915 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:74 / 74 (100.0%), covers 100.0% of PF10769, 128.6 bits

• Comparative Analysis of Transcriptomic Response of Escherichia coli K-12 MG1655 to Nine Representative Classes of Antibiotics
  Bie, Microbiology spectrum 2023
  • “...26.55 10.75 6.23 9.30 5.45 13.73 5.09 8.45 5.03 Cold shock-like protein Cold stress response b1915 yecF 3.38 4.55 2.54 4.29 3.26 4.34 2.94 2.32 4.52 DUF2594 domain-containing protein Unknown b2533 suhB 2.48 9.52 6.48 7.37 4.78 8.04 2.45 3.16 1.92 Nus factor rRNA maturation b2667...”
• In silico prediction and functional validation of sigma28-regulated genes in Chlamydia and Escherichia coli
  Yu, Journal of bacteriology 2006
  • “...Gene name b0132 b0763 b1760 yadD modA ynjH b1915 b3204 b3490 b4083 yecF ptsN yhiL yjcS Function Hypothetical protein Molybdate ABC transporter NADPH thioredoxin...”

Z3003 orf, hypothetical protein from Escherichia coli O157:H7 EDL933
Aligns to 1:74 / 74 (100.0%), covers 100.0% of PF10769, 126.9 bits

• Enterotoxigenic Escherichia coli Heat-Stable Toxin Increases the Rate of Zinc Release from Metallothionein and Is a Zinc- and Iron-Binding Peptide
  Kiefer, mSphere 2020
  • “...Briefly, T84 cells at confluence were incubated in DMEM-F-12 containing 1% FBS with 20M zardaverine (Z3003; Sigma-Aldrich) and 50M N -desethyl vardenafil (448184-46-1; Cayman Chemicals) at 37C and 5% CO 2 ( 91 93 ). Following a 1-h preincubation with phosphodiesterase inhibitors, ST or ST +...”

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