Family Search for PF10808 (DUF2542)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF10808 hits 2 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

STM2185 putative inner membrane protein from Salmonella typhimurium LT2
Aligns to 3:81 / 81 (97.5%), covers 100.0% of PF10808, 160.0 bits

• Identification of novel factors involved in modulating motility of Salmonella enterica serotype typhimurium
  Bogomolnaya, PloS one 2014
  • “...1.460.27 1.23 0.30 STM2095 rfbA 1.410.26 2.08 1.11 STM2133 1.08 0.10 1.550.46 STM2173 1.410.22 1.620.70 STM2185 1.620.22 1.490.56 STM2304 pmrD 1.490.23 1.710.44 STM2360 1.350.16 1.43 0.74 STM2513 shdA 1.370.23 1.14 0.26 STM2616 1.310.28 0.90 0.09 STM2763 1.680.35 1.52 0.79 STM2770 fljA 1.05 0.08 1.390.26 STM2867 hilC...”

YeiS / b2145 DUF2542 domain-containing protein YeiS from Escherichia coli K-12 substr. MG1655 (see paper)
b2145 predicted inner membrane protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:79 / 79 (100.0%), covers 100.0% of PF10808, 154.7 bits

• Fatty Acid Homeostasis Tunes Flagellar Motility by Activating Phase 2 Flagellin Expression, Contributing to Salmonella Gut Colonization
  Hoshino, Infection and immunity 2022 (secret)
• Bioinformatic prediction reveals posttranscriptional regulation of the chromosomal replication initiator gene dnaA by the attenuator sRNA rnTrpL in Escherichia coli
  Li, RNA biology 2021 (secret)
• Transcriptomic Response Analysis of Escherichia coli to Palladium Stress
  Joudeh, Frontiers in microbiology 2021
  • “...putative fimbria 197 32 b0336 codB Required for cytosine transport into the cell 130 23 b2145 yeiS Function unknown 130 103 b2269 elaD Protease, capable of cleaving an AMC-ubiquitin model substrate 119 13 b4665 ibsC Toxic component of a type I toxin-antitoxin (TA) system 117 28...”
• DNA microarray-based identification of genes controlled by autoinducer 2-stimulated quorum sensing in Escherichia coli
  DeLisa, Journal of bacteriology 2001
  • “...7.8 b2145 ................................................................................... 7.0 ybcJ...”

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