Family Search for PF10953 (DUF2754)

PF10953 hits 4 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YaiZ / b0380 DUF2754 domain-containing protein YaiZ from Escherichia coli K-12 substr. MG1655 (see paper)
b0380 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:70 / 70 (100.0%), covers 100.0% of PF10953, 164.6 bits

• Evolutionary dynamics of small RNAs in 27 Escherichia coli and Shigella genomes
  Skippington, Genome biology and evolution 2012
  • “...rlmD b2785 oxyS 27 Core Incongruent No dps b0812 oxyS 27 Core Incongruent No yaiZ b0380 oxyS 6 Variable Congruent No pqqL b1494 oxyS 17 Variable Incongruent No rcsA b1951 dsrA 26 Variable Incongruent No argR b3237 dsrA 27 Core Incongruent No dsrB b1952 dsrA 27...”
• Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses
  King, Applied and environmental microbiology 2010
  • “...ECs4111 ECs4197 ECs4416 ECs5464 b3292 b3585 b3755 b3179 b0380 b0631 b1445 b1848 b2141 b3238 b3346 b3536 b4537 Translation, ribosomal structure and biogenesis...”

c0486 Hypothetical protein yaiZ from Escherichia coli CFT073
Aligns to 45:114 / 114 (61.4%), covers 100.0% of PF10953, 162.6 bits

• yqhG Contributes to Oxidative Stress Resistance and Virulence of Uropathogenic Escherichia coli and Identification of Other Genes Altering Expression of Type 1 Fimbriae
  Bessaiah, Frontiers in cellular and infection microbiology 2019
  • “...fimB c5391 fimB FimB recombinase regulator for fimA UNKNOWN FUNCTION c0337 Putative conserved protein yaiZ c0486 yaiZ Hypothetical protein c1269 Hypothetical protein c1555 Putative DNA N-6-adenine-methyltransferase of bacteriophage ynjA c2154 ynjA Hypothetical protein yegQ c2611 yegQ Putative protease yegQ yqhG c3747 yqhG Hypothetical protein YqhG precursor...”

ECs0430 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 45:114 / 114 (61.4%), covers 100.0% of PF10953, 162.6 bits

• Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses
  King, Applied and environmental microbiology 2010
  • “...APPL. ENVIRON. MICROBIOL. ECs4157 ECs4461 ECs4697 ECs4058 ECs0430 ECs0669 ECs2049 ECs2558 ECs3033 ECs4111 ECs4197 ECs4416 ECs5464 b3292 b3585 b3755 b3179 b0380...”

ESA_RS13480 DUF2754 family protein from Cronobacter sakazakii ATCC BAA-894
Aligns to 1:70 / 71 (98.6%), covers 100.0% of PF10953, 146.7 bits

• The Global Response of Cronobacter sakazakii Cells to Amino Acid Deficiency
  Chen, Frontiers in microbiology 2018
  • “...Cellulose synthase ESA_RS13320 tsx -5.00 Nucleoside-specific channel-forming protein ESA_RS01515 yjiY -5.16 Carbon starvation protein A ESA_RS13480 yaiZ -5.42 Membrane protein ESA_RS02285 sdaB -5.51 L -serine ammonia-lyase ESA_RS17695 lldP -5.55 L -lactate permease ESA_RS04410 glpQ -5.83 Glycerophosphoryl diester phosphodiesterase ESA_RS04990 mglC -5.98 Galactoside ABC transporter permease ESA_RS04980...”

Or search for genetic data about PF10953 in the Fitness Browser