Family Search for PF10954 (DUF2755)

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PF10954 hits 2 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

KPN_00321 hypothetical protein from Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Aligns to 1:100 / 100 (100.0%), covers 100.0% of PF10954, 181.2 bits

• Capsule deletion via a λ-Red knockout system perturbs biofilm formation and fimbriae expression in Klebsiella pneumoniae MGH 78578
  Huang, BMC research notes 2014
  • “...level ( cps) p -value Fold change Up-regulated genes KPN_00042 Hypothetical 9.00 13.38 0.0021 20.82 KPN_00321 Hypothetical 6.63 9.20 0.0007 5.92 KPN_01030 Hypothetical 8.15 10.65 0.0170 5.66 KPN_01107 Hypothetical 9.41 13.32 0.0021 15.03 KPN_01226 Periplasmic protein 10.59 13.27 0.0052 6.38 KPN_01279 Lipoprotein, osmotically inducible 11.03 13.96...”

YaiY / b0379 DUF2755 domain-containing inner membrane protein YaiY from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b0379 predicted inner membrane protein from Escherichia coli str. K-12 substr. MG1655
Z0475 orf, hypothetical protein from Escherichia coli O157:H7 EDL933
ECs0429 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 1:101 / 102 (99.0%), covers 100.0% of PF10954, 165.7 bits

• Global analysis of extracytoplasmic stress signaling in Escherichia coli
  Bury-Moné, PLoS genetics 2009
  • “...inner membrane protein/cell wall degradation?; LpxM: Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1.9; 1.4 yaiY b0379 Inner membrane protein 3.8 ( 16.3 ) d treB treC b4240-39 PTS system trehalose-specific EIIBC components 2.0; - ompW J b1256 Outer membrane protein 2.3 ( 1.9 ) tnaL tnaA...”
  • “...1.9 spy b1743 Periplasmic protein related to spheroblast formation 1.1 ( 3.9 ) yaiY F b0379 Inner membrane protein 3.3 ( 17.9 ) d a Genes are grouped by putative or known operons (ordered in the direction of transcription). Genes whose expression was found to be...”
• Disruption of rcsB by a duplicated sequence in a curli-producing Escherichia coli O157:H7 results in differential gene expression in relation to biofilm formation, stress responses and metabolism
  Sharma, BMC microbiology 2017
  • “...Predicted pilus chaperone (cryptic) 2.13 0.04 yagZ Z0360 Predicted pilus major subunit 2.83 0.001 yaiY Z0475 Predicted inner membrane protein 33.49 1.6E-12 yaiE Z0487 Unknown 1.49 0.01 yajI Z0513 Unknown 3.71 1.3E-06 ybcI Z0682 Predicted inner membrane protein 2.48 0.004 Z0879 Unknown 2.95 0.04 ybjO Z1085...”
• Gene expression induced in Escherichia coli O157:H7 upon exposure to model apple juice
  Bergholz, Applied and environmental microbiology 2009
  • “...ECs0233 ECs0239 ECs0247 ECs0252 ECs0253 ECs0266 ECs0272 ECs0429 ECs0445 ECs0478 ECs0514 ECs0552 ECs0561 ECs0629 ECs0646 ECs0661 ECs0728 ECs0781 ECs0896 ECs0963...”

Or search for genetic data about PF10954 in the Fitness Browser