Family Search for PF10964 (DUF2766)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF10964 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YecJ / b4537 DUF2766 domain-containing protein YecJ from Escherichia coli K-12 substr. MG1655 (see paper)
UTI89_C2103 hypothetical protein from Escherichia coli UTI89
b4537 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:79 / 83 (95.2%), covers 100.0% of PF10964, 188.0 bits

• High-throughput sequencing of sorted expression libraries reveals inhibitors of bacterial cell division
  Mediati, BMC genomics 2018
  • “...R 1,961,2911,963,326 UTI89_C2055 zwf G 2036 19.0 1044.3 2,011,0102,012,850 UTI89_C2102 (yecI/ftnB) P 1841 6.7 159.7 UTI89_C2103 yecJ S UTI89_C2104 S UTI89_C2105 yecR SR UTI89_C2106 ftnA P 2,632,7992,635,972 RS13095 S 3174 15.0 1023.6 UTI89_C2682 -cIII S UTI89_C2683 kil2 R UTI89_C2684 S UTI89_C2685 S UTI89_C2686 erf S UTI89_C2687...”
• Gasdermin D associates with cellular regions bordering NETosis enrichment in human TB granulomas
  Fisher, 2023
• The Gene Expression Profile of Uropathogenic Escherichia coli in Women with Uncomplicated Urinary Tract Infections Is Recapitulated in the Mouse Model
  Frick-Cheng, mBio 2020
  • “...2.3 b1254 ydiE PF10636 family protein YdiE 2.1 b1705 yecJ DUF2766 domain-containing protein YecJ 2.5 b4537 yejL DUF1414 domain-containing protein YejL 2.2 b2187 yfaZ Putative porin YfaZ 2.9 b2250 yfhL Putative 4Fe-4S cluster-containing protein YfhL 2.6 b2562 yghD Putative type II secretion system M-type protein 3.6...”
• Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses
  King, Applied and environmental microbiology 2010
  • “...b0380 b0631 b1445 b1848 b2141 b3238 b3346 b3536 b4537 Translation, ribosomal structure and biogenesis Poorly characterized or not present in COGs Transcription...”

ECs5464 hypothetical protein from Escherichia coli O157:H7 str. Sakai
Aligns to 1:79 / 83 (95.2%), covers 100.0% of PF10964, 181.4 bits

• Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses
  King, Applied and environmental microbiology 2010
  • “...ECs0430 ECs0669 ECs2049 ECs2558 ECs3033 ECs4111 ECs4197 ECs4416 ECs5464 b3292 b3585 b3755 b3179 b0380 b0631 b1445 b1848 b2141 b3238 b3346 b3536 b4537...”

YPTB1616 hypothetical protein from Yersinia pseudotuberculosis IP 32953
Aligns to 1:79 / 79 (100.0%), covers 98.7% of PF10964, 140.1 bits

• Growth of Yersinia pseudotuberculosis in human plasma: impacts on virulence and metabolic gene expression
  Rosso, BMC microbiology 2008
  • “...(0.02) YPTB1583 YPO1574 putative exported protein 0.605 (< 0.001) YPTB1602 (int) or4274 integrase 0.592 (0.026) YPTB1616 or1193 conserved hypothetical protein 0.677 (0.016) 1.488 (0.014) YPTB1619 YPO1741 hypothetical protein 1.496 (0.025) YPTB1622 YPO1744 putative exported protein 1.671 (0.019) YPTB1663 YPO1788 putative acyl carrier protein 1.57 (0.049) YPTB1664...”

Or search for genetic data about PF10964 in the Fitness Browser