Family Search for PF10965 (DUF2767)

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PF10965 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

FumD / b1675 fumarase D (EC 4.2.1.2) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
fumD / P0ACX5 fumarase D (EC 4.2.1.2) from Escherichia coli (strain K12) (see 2 papers)
FUMD_ECOLI / P0ACX5 Fumarase D; EC 4.2.1.2 from Escherichia coli (strain K12) (see 2 papers)
b1675 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 1:67 / 69 (97.1%), covers 100.0% of PF10965, 138.7 bits

• function: In vitro catalyzes the addition of water to fumarate, forming malate. Cannot catalyze the reverse reaction. Cannot use the cis-isomer maleate as substrate.
  catalytic activity: (S)-malate = fumarate + H2O (RHEA:12460)
  disruption phenotype: Cells grow to slightly higher density than wild- type in sublethal levels of streptomycin (PubMed:25316676).
• Proteomic analyses revealed the antibacterial mechanism of Aronia melanocarpa isolated anthocyanins against Escherichia coli O157: H7
  Deng, Current research in food science 2022
  • “...phosphorylase Up P00363 frdA Fumarate reductase flavoprotein subunit Up P77475 yqaB Fructose-1-phosphate phosphatase YqaB Up P0ACX5 fumD Fumarase D Up P31467 yieH 6-phosphogluconate phosphatase Up P42632 tdcE PFL-like enzyme TdcE Up P36683 acnB Aconitate hydratase B Up A8A036 maeA NAD-dependent malic enzyme Up P08997 aceB Malate...”
• 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
  , Haematologica 2013
• High-throughput comparison of gene fitness among related bacteria
  Canals, BMC genomics 2012
  • “...b1733 15 17 67 75 54 46 50 48 STM14_1682 orf70 Hypothetical protein STM1388 t1256 b1675 12 11 32 71 34 27 37 29 STM14_1877 d Putative coiled-coil protein STM1554 t1468 15 16 39 37 79 81 78 81 STM14_1977 d Putative periplasmic binding protein STM1633...”

STM14_1682 fumarate hydratase FumD from Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
STM1388 putative cytoplasmic protein from Salmonella typhimurium LT2
STY1732 conserved hypothetical protein from Salmonella enterica subsp. enterica serovar Typhi str. CT18
t1256 conserved hypothetical protein from Salmonella enterica subsp. enterica serovar Typhi Ty2
Aligns to 1:67 / 70 (95.7%), covers 100.0% of PF10965, 127.9 bits

• High-throughput comparison of gene fitness among related bacteria
  Canals, BMC genomics 2012
  • “...STM14_1599 celG Hypothetical protein STM1317 t1196 b1733 15 17 67 75 54 46 50 48 STM14_1682 orf70 Hypothetical protein STM1388 t1256 b1675 12 11 32 71 34 27 37 29 STM14_1877 d Putative coiled-coil protein STM1554 t1468 15 16 39 37 79 81 78 81 STM14_1977...”
• High-throughput comparison of gene fitness among related bacteria
  Canals, BMC genomics 2012
  • “...STM1317 t1196 b1733 15 17 67 75 54 46 50 48 STM14_1682 orf70 Hypothetical protein STM1388 t1256 b1675 12 11 32 71 34 27 37 29 STM14_1877 d Putative coiled-coil protein STM1554 t1468 15 16 39 37 79 81 78 81 STM14_1977 d Putative periplasmic binding...”
• In vivo expression of Salmonella enterica serotype Typhi genes in the blood of patients with typhoid fever in Bangladesh
  Sheikh, PLoS neglected tropical diseases 2011
  • “...protein STY1058-60,1063-64,1069 putative prophage proteins STY1323 t1640 conserved hypothetical protein STY1548 t1434 conserved hypothetical protein STY1732 t1256 ydhZ conserved hypothetical protein STY1916 t1087 hyaD hydrogenase-1 operon protein HyaD STY2244 t0835 pduB putative propanediol utilization protein PduB STY2608 t0487 conserved hypothetical protein STY3448 t3185 yraN conserved hypothetical...”
• The relationship between ABO blood group, von Willebrand factor, and primary hemostasis
  Ward, Blood 2020 (secret)
• High-throughput comparison of gene fitness among related bacteria
  Canals, BMC genomics 2012
  • “...t1196 b1733 15 17 67 75 54 46 50 48 STM14_1682 orf70 Hypothetical protein STM1388 t1256 b1675 12 11 32 71 34 27 37 29 STM14_1877 d Putative coiled-coil protein STM1554 t1468 15 16 39 37 79 81 78 81 STM14_1977 d Putative periplasmic binding protein...”
• In vivo expression of Salmonella enterica serotype Typhi genes in the blood of patients with typhoid fever in Bangladesh
  Sheikh, PLoS neglected tropical diseases 2011
  • “...STY1058-60,1063-64,1069 putative prophage proteins STY1323 t1640 conserved hypothetical protein STY1548 t1434 conserved hypothetical protein STY1732 t1256 ydhZ conserved hypothetical protein STY1916 t1087 hyaD hydrogenase-1 operon protein HyaD STY2244 t0835 pduB putative propanediol utilization protein PduB STY2608 t0487 conserved hypothetical protein STY3448 t3185 yraN conserved hypothetical protein...”
• Posters
  , Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases 2007
  • “...1064 44 20 t1257 20 9 t951 3 1 t1443 3 1 t104 1 0.45 t1256 1 0.45 t1555 1 0.45 t1774 1 0.45 t1779 1 0.45 spa-CC 045; NY/Japan clonality t04514 6 t0013 1 t1154 1 0.45 spa-CC 032 t032 2 1 t891 1 0.45...”

FZF21_00650 fumarate hydratase FumD from Enterobacter sp. LU1
Aligns to 1:67 / 69 (97.1%), covers 100.0% of PF10965, 127.3 bits

• A Genomic Perspective on the Potential of Wild-Type Rumen Bacterium Enterobacter sp. LU1 as an Industrial Platform for Bio-Based Succinate Production
  Szczerba, International journal of molecular sciences 2020
  • “...on the KEGG metabolic analysis, genes encoding phosphoenolpyruvate carboxylase (FZF21_10785), malate dehydrogenase (FZF21_12620), fumarate hydratase (FZF21_00650; FZF21_00325; FZF21_00320; FZF21_18775), and fumarate reductase (FZF21_07995; FZF21_07990; FZF21_07985; FZF21_07980) have been detected in the LU1 strain genome. Another potential biochemical route for succinate production is the glyoxylate pathway, where...”

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