Family Search for PF10971 (DUF2773)

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PF10971 hits 1 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YdbD / b1407 DUF2773 domain-containing protein YdbD from Escherichia coli K-12 substr. MG1655 (see 3 papers)
ydbD / EW|b1407 uncharacterized protein ydbD from Escherichia coli K12 (see paper)
P25907 Uncharacterized protein YdbD from Escherichia coli (strain K12)
b1407 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 688:768 / 768 (10.5%), covers 100.0% of PF10971, 154.3 bits

• Knowns and Unknowns of Vitamin B₆ Metabolism in Escherichia coli
  Tramonti, EcoSal Plus 2021
  • “...The downstream gene ydbD encodes an uncharacterized protein probably involved in detoxification of methylglyoxal (UniProt P25907). The promoters of these two gene were only predicted and it is still unknown if the pdxI gene is transcribed as a single transcription unit or together with ydbD (...”
• NtrBC and Nac contribute to efficient Shigella flexneri intracellular replication
  Waddell, Journal of bacteriology 2014
  • “...McbR GntR-type transcriptional regulator Predicted protein Conserved protein b1407 b1418 b1422 b1446 b1447 b1450 b1847 b4217 P value 0.04 6.15E07 0.12 0.0007...”
  • “...Of the remaining genes that are activated by Nac, b1407, b1447, and b1847 are also notable because their expression was upregulated 14-fold, 4-fold, and 13fold,...”
• 18th Congress of the European Hematology Association, Stockholm, Sweden, June 13–16, 2013
  , Haematologica 2013
• Global analysis of extracytoplasmic stress signaling in Escherichia coli
  Bury-Moné, PLoS genetics 2009
  • “...factor 2 (RF-2) -; 4.0; 2.3; 4.3 ymbA Rh b09452 Conserved lipoprotein YmbA 4.2 ydbD b1407 Uncharacterized protein induced by methylglyoxal 3. 9 matA b0294 Putative HTH-type transcriptional regulator 3.8 smpA Re K Rh b2617 Component of Outer Membrane Protein Assembly Complex 3.6 ( 9.4 )...”
• On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer
  Yin, BMC evolutionary biology 2006
  • “...S. aureus strains: Mu50 and COL. Another example of an orthologous ORFan is hypothetical protein b1407 (gi: 16129368) from Escherichia coli strain K12, with U = 0.092 and H = 7. It has highly similar homologs in E. coli O157H7 strain EDL933 and E. coli O157H7,...”
• luxS-dependent gene regulation in Escherichia coli K-12 revealed by genomic expression profiling
  Wang, Journal of bacteriology 2005
  • “...b3945 b0648 b1680 b0823 b1112 b4288 b4310 b3103 b0621 b1407 b0076 b2723 b3683 b3028 b2968 b0579 b3220 b0260 b3046 b2919 b3906 b2060 b0790 b1720 b1010 b2797...”

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