PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF11162 (DUF2946)

PF11162.8 hits 18 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

LINJ_01_0010 hypothetical protein, unknown function from Leishmania infantum JPCM5
Aligns to 1:90 / 333 (27.0%), covers 87.0% of PF11162, 71.1 bits

DR97_4078 DUF2946 domain-containing protein from Pseudomonas aeruginosa
Aligns to 35:172 / 176 (78.4%), covers 100.0% of PF11162, 69.3 bits

BP2923 putative lipoprotein (NCBI) from Bordetella pertussis Tohama I
Aligns to 17:142 / 145 (86.9%), covers 100.0% of PF11162, 67.9 bits

KPNJ2_01377 DUF2946 domain-containing protein from Klebsiella pneumoniae 30684/NJST258_2
Aligns to 16:145 / 152 (85.5%), covers 100.0% of PF11162, 64.8 bits

PSPPH_4466 hypothetical protein (NCBI) from Pseudomonas syringae pv. phaseolicola 1448A
Aligns to 46:166 / 171 (70.8%), covers 100.0% of PF11162, 59.2 bits

AO356_08325 predicted copper homeostasis protein from Pseudomonas fluorescens FW300-N2C3
Aligns to 7:131 / 134 (93.3%), covers 99.1% of PF11162, 58.8 bits

BPSS1743 putative exported protein (NCBI) from Burkholderia pseudomallei K96243
Aligns to 10:128 / 131 (90.8%), covers 100.0% of PF11162, 55.7 bits

PaeAG1_01361 DUF2946 family protein from Pseudomonas aeruginosa
Aligns to 1:131 / 135 (97.0%), covers 93.9% of PF11162, 53.1 bits

AO353_13585 predicted copper homeostasis protein from Pseudomonas fluorescens FW300-N2E3
Aligns to 9:131 / 133 (92.5%), covers 100.0% of PF11162, 53.1 bits

PFL_0651 conserved hypothetical protein (NCBI) from Pseudomonas fluorescens Pf-5
Aligns to 9:130 / 132 (92.4%), covers 100.0% of PF11162, 47.7 bits

PA3786 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 9:127 / 129 (92.2%), covers 100.0% of PF11162, 45.3 bits

PA14_15110 hypothetical protein (NCBI) from Pseudomonas aeruginosa UCBPP-PA14
Aligns to 9:127 / 129 (92.2%), covers 100.0% of PF11162, 43.1 bits

Achr_23750 DUF2946 domain-containing protein from Azotobacter chroococcum NCIMB 8003
Aligns to 12:122 / 122 (91.0%), covers 99.1% of PF11162, 40.4 bits

Nwi_2630 conserved hypothetical protein (NCBI) from Nitrobacter winogradskyi Nb-255
Aligns to 12:139 / 141 (90.8%), covers 99.1% of PF11162, 37.8 bits

PA0433 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 22:143 / 144 (84.7%), covers 97.4% of PF11162, 34.4 bits

CC1775 hypothetical protein (NCBI ptt file) from Caulobacter crescentus CB15
Aligns to 15:131 / 134 (87.3%), covers 97.4% of PF11162, 32.7 bits

XOO3404 hypothetical protein (NCBI) from Xanthomonas oryzae pv. oryzae KACC10331
Aligns to 35:165 / 168 (78.0%), covers 98.3% of PF11162, 30.6 bits

bll4882 bll4882 (NCBI ptt file) from Bradyrhizobium japonicum USDA 110
Aligns to 14:125 / 128 (87.5%), covers 98.3% of PF11162, 28.3 bits

Or search for genetic data about PF11162 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory