Family Search for PF11218 (DUF3011)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF11218 hits 3 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Smlt3139 hypothetical protein from Stenotrophomonas maltophilia K279a
Aligns to 37:239 / 242 (83.9%), covers 100.0% of PF11218, 259.0 bits

• Functional characterization of the RNA chaperone Hfq in the opportunistic human pathogen Stenotrophomonas maltophilia
  Roscetto, Journal of bacteriology 2012
  • “...Smlt1445 Smlt1476 Smlt1720 Smlt1742 Smlt2477 Smlt3003 Smlt3033 Smlt3139 Smlt3461 Smlt3591 Smlt3660 Smlt3671 hipA pefL recX pilJ Smlt3696 Smlt3823 Smlt3911...”

ADEL_APLDA / C0HK25 Lectin ADEL from Aplysia dactylomela (Spotted sea hare) (see paper)
Aligns to 8:210 / 217 (93.5%), covers 89.8% of PF11218, 88.3 bits

• function: Binds in decreasing order of affinity: galacturonic acid, D- galactosamine, methyl-alpha-D-galactopyranoside and further galactose- containing carbohydrates. Has hemagglutinating activity against human and rabbit erythrocytes.
  subunit: Homodimer; disulfide-linked.

Smlt0339 hypothetical protein from Stenotrophomonas maltophilia K279a
Aligns to 98:191 / 256 (36.7%), covers 33.5% of PF11218, 66.7 bits

• Stenotrophomonas maltophilia Differential Gene Expression in Synthetic Cystic Fibrosis Sputum Reveals Shared and Cystic Fibrosis Strain-Specific Responses to the Sputum Environment
  Willsey, Journal of bacteriology 2019
  • “...SMLT_06015 Smlt1238 4.88 SMLT_13190 Smlt2769 4.14 SMLT_01605 Smlt0339 4.07 SMLT_13200 Smlt2771 3.88 SMLT_13195 Smlt2770 3.75 SMLT_13210 Smlt2773 3.74 SMLT_02710...”

Or search for genetic data about PF11218 in the Fitness Browser