PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF11254 (DUF3053)

PF11254.8 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YiaF / b3554 DUF3053 domain-containing protein YiaF from Escherichia coli K-12 substr. MG1655 (see 2 papers)
P0ADK0 Uncharacterized protein YiaF from Escherichia coli (strain K12)
b3554 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 14:232 / 236 (92.8%), covers 99.1% of PF11254, 312.7 bits

Z4979 No description from Escherichia coli O157:H7 EDL933
c4373 Hypothetical protein yiaF (NCBI ptt file) from Escherichia coli CFT073
Aligns to 54:272 / 276 (79.3%), covers 99.1% of PF11254, 312.0 bits

YPTB3917 putative exported protein (NCBI) from Yersinia pseudotuberculosis IP 32953
Aligns to 19:237 / 241 (90.9%), covers 99.1% of PF11254, 311.1 bits

STM3647 putative outer membrane lipoprotein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 14:232 / 236 (92.8%), covers 99.1% of PF11254, 310.9 bits

YPO4070 putative exported protein (NCBI ptt file) from Yersinia pestis CO92
Aligns to 19:237 / 241 (90.9%), covers 99.1% of PF11254, 307.8 bits

PSPTO_2769 lipoprotein, putative (NCBI ptt file) from Pseudomonas syringae pv. tomato str. DC3000
Aligns to 9:227 / 233 (94.0%), covers 99.5% of PF11254, 259.4 bits

STM1188 putative inner membrane lipoprotein (NCBI ptt file) from Salmonella typhimurium LT2
Aligns to 12:241 / 247 (93.1%), covers 99.5% of PF11254, 254.1 bits

PSPPH_2654 lipoprotein, putative (NCBI) from Pseudomonas syringae pv. phaseolicola 1448A
Aligns to 8:227 / 233 (94.4%), covers 99.5% of PF11254, 253.4 bits

SC1135 putative inner membrane lipoprotein (NCBI) from Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Aligns to 18:247 / 253 (90.9%), covers 99.5% of PF11254, 252.6 bits

SEN1861 putative inner membrane lipoprotein (RefSeq) from Salmonella enterica subsp. enterica serovar Enteritidis str. P125109
Aligns to 12:241 / 247 (93.1%), covers 99.5% of PF11254, 250.9 bits

Or search for genetic data about PF11254 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory