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Family Search for PF11254 (DUF3053)

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Running HMMer for PF11254

PF11254 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YiaF / b3554 DUF3053 domain-containing protein YiaF from Escherichia coli K-12 substr. MG1655 (see 2 papers)
P0ADK0 Uncharacterized protein YiaF from Escherichia coli (strain K12)
b3554 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 14:232 / 236 (92.8%), covers 99.1% of PF11254, 326.4 bits

c4373 Hypothetical protein yiaF from Escherichia coli CFT073
Z4979 No description from Escherichia coli O157:H7 EDL933
Aligns to 54:272 / 276 (79.3%), covers 99.1% of PF11254, 325.6 bits

STM3647 putative outer membrane lipoprotein from Salmonella typhimurium LT2
Aligns to 14:232 / 236 (92.8%), covers 99.5% of PF11254, 320.9 bits

YPTB3917 putative exported protein from Yersinia pseudotuberculosis IP 32953
Aligns to 19:237 / 241 (90.9%), covers 99.5% of PF11254, 319.4 bits

YPO4070 putative exported protein from Yersinia pestis CO92
Aligns to 19:237 / 241 (90.9%), covers 99.5% of PF11254, 316.6 bits

PSPTO_2769 lipoprotein, putative from Pseudomonas syringae pv. tomato str. DC3000
Aligns to 8:227 / 233 (94.4%), covers 98.2% of PF11254, 273.3 bits

PSPPH_2654 lipoprotein, putative from Pseudomonas syringae pv. phaseolicola 1448A
Aligns to 8:227 / 233 (94.4%), covers 98.6% of PF11254, 266.3 bits

STM1188 putative inner membrane lipoprotein from Salmonella typhimurium LT2
Aligns to 12:241 / 247 (93.1%), covers 99.5% of PF11254, 248.8 bits

SC1135 putative inner membrane lipoprotein from Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
Aligns to 18:247 / 253 (90.9%), covers 99.5% of PF11254, 247.6 bits

BP2886 putative lipoprotein from Bordetella pertussis Tohama I
Aligns to 23:240 / 250 (87.2%), covers 99.1% of PF11254, 246.3 bits

SEN1861 putative inner membrane lipoprotein from Salmonella enterica subsp. enterica serovar Enteritidis str. P125109
Aligns to 12:241 / 247 (93.1%), covers 99.5% of PF11254, 245.6 bits

Or search for genetic data about PF11254 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory