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Family Search for PF11523 (DUF3223)

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PF11523 hits 14 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

DCL_SOLLC / Q42463 Protein DCL, chloroplastic; Defective chloroplasts and leaves protein from Solanum lycopersicum (Tomato) (Lycopersicon esculentum) (see 2 papers)
Aligns to 121:197 / 224 (34.4%), covers 100.0% of PF11523, 106.5 bits

DCL_ARATH / Q9C642 Protein DCL homolog, chloroplastic; AtDCL from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 116:192 / 219 (35.2%), covers 100.0% of PF11523, 105.9 bits

EM514_ARATH / Q8L557 Protein EMBRYO DEFECTIVE 514; Protein DOMINO 1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 85:158 / 202 (36.6%), covers 98.7% of PF11523, 99.6 bits

NRPE1_ARATH / Q5D869 DNA-directed RNA polymerase V subunit 1; DNA-directed RNA polymerase D subunit 1b; AtNRPD1b; Nuclear RNA polymerase D 1b; DNA-directed RNA polymerase E subunit 1; Nuclear RNA polymerase E 1; Protein DEFECTIVE IN MERISTEM SILENCING 5; Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3; Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1; RNA polymerase IV subunit 1; POL IV 1; EC 2.7.7.6 from Arabidopsis thaliana (Mouse-ear cress) (see 16 papers)
Aligns to 1751:1827 / 1976 (3.9%), covers 98.7% of PF11523, 95.9 bits

NRPD1_ARATH / Q9LQ02 DNA-directed RNA polymerase IV subunit 1; DNA-directed RNA polymerase D subunit 1; AtNRPD1a; Nuclear RNA polymerase D 1a; Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 3; Protein SILENCING DEFECTIVE 4; Protein SILENCING MOVEMENT DEFICIENT 2; RNA polymerase IV subunit 1a; POL IV 1a; EC 2.7.7.6 from Arabidopsis thaliana (Mouse-ear cress) (see 21 papers)
Aligns to 1347:1419 / 1453 (5.0%), covers 100.0% of PF11523, 84.5 bits

Or search for genetic data about PF11523 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory