Family Search for PF11622 (DUF3251)

PF11622 hits 6 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YajI / b0412 putative lipoprotein YajI from Escherichia coli K-12 substr. MG1655 (see paper)
b0412 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 20:179 / 179 (89.4%), covers 97.5% of PF11622, 300.3 bits

• Genome-wide analysis of lipoprotein expression in Escherichia coli MG1655
  Brokx, Journal of bacteriology 2004
  • “...147.26 yaaY yajI ybfN yccZ ymcC csgG yfiL yghJ yhiU yjbF b0024 b0412 b0682 b0983 b0986 b1037 b2602 b2974 b3513 b4027 5.55 A 20.25 A 15.6 M 25.95 A 15.1 M 2.8 A...”

Z0513 hypothetical protein from Escherichia coli O157:H7 EDL933
Aligns to 20:179 / 179 (89.4%), covers 97.5% of PF11622, 298.3 bits

• Disruption of rcsB by a duplicated sequence in a curli-producing Escherichia coli O157:H7 results in differential gene expression in relation to biofilm formation, stress responses and metabolism
  Sharma, BMC microbiology 2017
  • “...0.001 yaiY Z0475 Predicted inner membrane protein 33.49 1.6E-12 yaiE Z0487 Unknown 1.49 0.01 yajI Z0513 Unknown 3.71 1.3E-06 ybcI Z0682 Predicted inner membrane protein 2.48 0.004 Z0879 Unknown 2.95 0.04 ybjO Z1085 Predicted inner membrane protein 2.35 4.3E-04 ybjX Z1112 Unknown 1.51 0.01 ymcD Z1404...”
• Characterizing the Escherichia coli O157:H7 proteome including protein associations with higher order assemblies
  Pieper, PloS one 2011
  • “...L (hydr LS) PP 207 0 LSGC 81 D seq, 54 2 uncharacterized lipoprotein YajI Z0513 yajI 19602 L (IM or OM) unkn 169 0 LSAC 40 V seq, 20 2* putative tetratricopeptide repeat lipoprotein Z4203 (ygeR) 23480 L (IM or OM) unkn 130 24 LAGC...”

c0522 hypothetical protein from Escherichia coli CFT073
Aligns to 20:179 / 179 (89.4%), covers 97.5% of PF11622, 295.8 bits

• F1C fimbriae play an important role in biofilm formation and intestinal colonization by the Escherichia coli commensal strain Nissle 1917
  Lasaro, Applied and environmental microbiology 2009
  • “...metabolism mutants J43A4 J54B6 J10E1 J2A7 W4H2 aspA (c0522) ilvI (c0095) ybiW (c0908) cmk (c1048) pyrD (c1081) Aspartate ammonia-lyase Acetolactate synthase 3...”

STM0414 putative outer membrane lipoprotein from Salmonella typhimurium LT2
Aligns to 20:179 / 179 (89.4%), covers 97.5% of PF11622, 294.3 bits

• Redundant hydrogen peroxide scavengers contribute to Salmonella virulence and oxidative stress resistance
  Hébrard, Journal of bacteriology 2009
  • “...A noncoding (n.c.) DNA domain located between STM0413 and STM0414 was used as a control to monitor the basal level of expression due to residual genomic DNA....”

STY0452 putative lipoprotein from Salmonella enterica subsp. enterica serovar Typhi str. CT18
Aligns to 20:179 / 179 (89.4%), covers 97.5% of PF11622, 292.6 bits

• The origins of haplotype 58 (H58) Salmonella enterica serovar Typhi
  Carey, 2022
• An evaluation of purified Salmonella Typhi protein antigens for the serological diagnosis of acute typhoid fever
  Tran, The Journal of infection 2017
  • “...Gene name Amino acid identity S . Typhi CT18/ S . Paratyphi A AKU_12601 Annotation STY0452 IgM yajI 163/165 (98%) Putative lipoprotein Prokaryotic homolog of protein DJ-1 STY0796 IgM ybgF 260/262 (99%) Putative exported protein Tol/pal system protein STY1086 IgM 187/187 (100%) Putative lipoprotein STY1372 IgM...”
  • “...dots. A) Boxplots of antibody responses against (from left to right and upper to lower) STY0452, STY0769, STY1086, STY1372, STY1612, STY1522, STY1703, STY1767, STY3208, and STY4190. All mean antibody measurements were statistically significant between the healthy controls and typhoid infections and between other infections and typhoid...”
• The cotranscribed Salmonella enterica sv. Typhi tsx and impX genes encode opposing nucleoside-specific import and export proteins
  Bucarey, Genetics 2006
  • “...bp downstream of an open reading frame designated jajI (STY0452), which is also transcribed in the same direction and is separated by 252 bp from the potential...”

FG174_04965 DUF3251 domain-containing protein from Serratia marcescens
Aligns to 20:184 / 186 (88.7%), covers 96.9% of PF11622, 168.7 bits

• Microbial Reduction of Fumonisin B1 by the New Isolate Serratia marcescens 329-2
  Keawmanee, Toxins 2021
  • “...with the control group. Entry Protein Names Gene Names Fold Change A0A514I8F1 DUF3251 domain-containing protein FG174_04965 0.50 A0A086FBJ7 Outer membrane protein assembly factor BamD bamD 0.48 A0A6G8TR73 Outer membrane lipoprotein RcsF rcsF 0.48 A0A080UZC4 Tol-Pal system protein TolR tolR 0.48 A0A2V4H3Z0 Ribose-phosphate pyrophosphokinase prs 0.47 V5YU02...”

Or search for genetic data about PF11622 in the Fitness Browser