Family Search for PF11899 (DUF3419)

PF11899 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

FGSG_00742 hypothetical protein from Fusarium graminearum PH-1
Aligns to 416:811 / 835 (47.4%), covers 99.7% of PF11899, 540.3 bits

• Cellular Tracking and Gene Profiling of Fusarium graminearum during Maize Stalk Rot Disease Development Elucidates Its Strategies in Confronting Phosphorus Limitation in the Host Apoplast
  Zhang, PLoS pathogens 2016
  • “...in maize stalk if it is not PC or PE. We noted differential expression of FGSG_00742 encoding a putative S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase (also called betaine lipid synthase, BTA1). This enzyme is responsible for the conversion of DAG to diacylglyceryl-N,N,N-trimethylhomoserine (DGTS). DGTS is a phosphorus-free lipid, but...”
  • “...the glycerophospholipid PC in structure and physical phase behavior [ 59 ]. The expression of FGSG_00742 at 18 hai was very significantly higher than that in in vitro growth, and more than 200-fold higher than in spores (0 hai). Almost no expression of BTA1 was detected...”

An02g02840 uncharacterized protein from Aspergillus niger
Aligns to 378:772 / 802 (49.3%), covers 99.7% of PF11899, 537.5 bits

• Itaconic acid degradation in Aspergillus niger: the role of unexpected bioconversion pathways
  Hossain, Fungal biology and biotechnology 2019
  • “...1310.11 ANI_1_1486074 An08g11030 3-Phytase B Secreted 0.03 0.21 5.94 6.99 27.36 32.28 1771.34 3663.34 ANI_1_2368024 An02g02840 Sialidase Secreted 0.05 0.06 7.22 6.81 0.21 0.30 184.78 139.52 ANI_1_236084 An09g02180 Lipase Secreted/Mito 0.34 0.30 3.96 6.78 2.43 2.55 67.01 479.51 ANI_1_1848144 An16g06190 Metabolite transport protein GIT1 PM 0.04...”

BCIN_05g04180 hypothetical protein from Botrytis cinerea B05.10
Aligns to 428:829 / 859 (46.8%), covers 99.7% of PF11899, 528.9 bits

• Transcriptome analysis and functional validation reveal a novel gene, BcCGF1, that enhances fungal virulence by promoting infection-related development and host penetration
  Zhang, Molecular plant pathology 2020
  • “...75.6 Acid phosphatase precursor Yes BCIN_14g01070 BCIN_14g01070 74.0 Hypothetical protein similar to alcohol dehydrogenase No BCIN_05g04180 BCIN_05g04180 73.8 Hypothetical protein similar to betaine lipid synthase No BCIN_01g01550 BCIN_01g01550 72.3 Hypothetical protein No BCIN_06g00130 BCIN_06g00130 70.0 Oligopeptide transporter No BCIN_04g02930 Bmr5 63.6 Macrolide transporter ATPbinding/permease protein No...”

Pc22g21330 uncharacterized protein from Penicillium rubens
Aligns to 390:784 / 821 (48.1%), covers 99.7% of PF11899, 528.6 bits

• Potential molecular mechanisms for fruiting body formation of Cordyceps illustrated in the case of Cordyceps sinensis
  Feng, Mycology 2017
  • “...[ Aspergillus terreus NIH2624] C 89 4.09 gi|115,432,960 79.8 4.97 138 100 23 0 132 Pc22g21330 [ Penicillium chrysogenum Wisconsin 541255] C 6 3.99 gi|255,950,526 93.8 8.65 63 96.036 133 Conserved hypothetical protein [ Magnaporthe oryzae 7015] C 27 3.82 gi|39,953,501 34.3 6.85 188 100 104...”

CHLREDRAFT_77062 uncharacterized protein from Chlamydomonas reinhardtii
Q6DN05 Betaine lipid synthase from Chlamydomonas reinhardtii
Aligns to 283:659 / 666 (56.6%), covers 98.7% of PF11899, 397.8 bits

• Diacylglyceryl-N,N,N-trimethylhomoserine-dependent lipid remodeling in a green alga, Chlorella kessleri
  Oishi, Communications biology 2022
  • “...analysis, the amino acid sequences of BTA1 homologs were searched in available databases with CrBTA1 (CHLREDRAFT_77062) and BtaA (RSP_0856) and BtaB (RSP_0857) of Rhodobacter sphaeroides 2.4.1 as queries. The homolog sequences of CrBTA1 obtained are summarized in Supplementary Table 2 . The sequences were aligned after...”
• Quantitative proteomic comparison of salt stress in Chlamydomonas reinhardtii and the snow alga Chlamydomonas nivalis reveals mechanisms for salt-triggered fatty acid accumulation via reallocation of carbon resources
  Hounslow, Biotechnology for biofuels 2021
  • “...[ 63 ] 1.162 1.181 1.209 1.250 1.375 A8J2S0 Citrate synthase Tricarboxylic acid cycle -2.725 Q6DN05 Betaine lipid synthase Betaine lipid synthesis, including DGTS synthesis -1.093 A8HXT4 Pyruvate carboxylase Pyruvate metabolism, gluconeogenesis, links carbohydrate and lipid metabolism -1.047 -1.100 A8JGF4 Biotin carboxylase, acetyl-CoA carboxylase component Malonyl-CoA...”

Atu2119 hypothetical protein from Agrobacterium tumefaciens str. C58 (Cereon)
Aligns to 31:413 / 416 (92.1%), covers 98.7% of PF11899, 394.3 bits

• Arginine-Rich Small Proteins with a Domain of Unknown Function, DUF1127, Play a Role in Phosphate and Carbon Metabolism of Agrobacterium tumefaciens
  Kraus, Journal of bacteriology 2020 (secret)
• Membrane lipids in Agrobacterium tumefaciens: biosynthetic pathways and importance for pathogenesis
  Aktas, Frontiers in plant science 2014
  • “...to DGTS. Expression of the sinorhizobial btaA and btaB genes is PhoB regulated. BtaA ( atu2119 ) and BtaB ( atu2120 ) homologs which have not been characterized yet are encoded in the A. tumefaciens genome suggesting a similar DGTS biosynthesis and regulation ( Yuan et...”
• Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria
  Yuan, Nucleic acids research 2006
  • “...G Membrane lipids 1 SMc01848 TCGTCATCAAAGTGTAGC 47 0.41 S.meliloti Hypothetical protein ( btaA -like) 2 Atu2119 CTGTCATCAAACTGTAGC 44 0.58 A.tumefaciens Hypothetical protein ( btaA -like) 3 mlr1574 CTGTCACCGGCCTGTCAT +1 0.55 M.loti Hypothetical protein ( btaA -like) H Exopolysaccharide 1 SMb21317 CTGTCATGCACCTGCATC 385 0.39 S.meliloti expG ,...”
• Phosphorus limitation enhances biofilm formation of the plant pathogen Agrobacterium tumefaciens through the PhoR-PhoB regulatory system
  Danhorn, Journal of bacteriology 2004
  • “...C58 sequence upstream of the operon encoding its BtaA (Atu2119) and BtaB (Atu2120) orthologues reveals a strong consensus PHO box, a putative binding site for...”

SMc01848 CONSERVED HYPOTHETICAL PROTEIN from Sinorhizobium meliloti 1021
Aligns to 32:414 / 416 (92.1%), covers 98.7% of PF11899, 382.1 bits

• Transcriptomic Insight in the Control of Legume Root Secondary Infection by the Sinorhizobium meliloti Transcriptional Regulator Clr
  Zou, Frontiers in microbiology 2017
  • “...-1,3779 smc03806 GlnK nitrogen regulatory protein PII -1,3264 -1,3172 smc03072 Conserved hypothetical protein -1,5406 -1,2392 smc01848 Conserved hypothetical protein -1,4597 -1,2183 smc03052 FlgD basal body rod modification protein -1,1339 -1,2173 smb20263 Putative ABC transporter periplasmic protein -1,177 -1,1958 smc03046 Putative transcription regulator protein -1,0913 -1,149 smc02588...”
• Sinorhizobium meliloti phospholipase C required for lipid remodeling during phosphorus limitation
  Zavaleta-Pastor, Proceedings of the National Academy of Sciences of the United States of America 2010
  • “...S-adenosylmethionine: DAG 3-amino-3-carboxypropyl transferase (SMc01848); BtaB, diacylglyceryl homoserine N-methyltransferase (SMc01849); CgmB, cyclic...”
  • “...biosynthesis (Fig. 4), SqdB (SMc03961) and BtaA (SMc01848), respectively, are preceded by a Pho box that mediates PhoB-controlled expression under phosphorus...”
• Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria
  Yuan, Nucleic acids research 2006
  • “...0.4 Hypothetical protein 33 SMc04280 Microarray c CTTTTGTAAAGATTTCAT 81 0.37 Hypothetical signal peptide protein 34 SMc01848 Microarray c TCGTCATCAAAGTGTAGC 47 0.41 Hypothetical protein ( btaA -like) * 2 a Pho-box sequences detected in this study and also by Krol and Becker (31). b Pho-box sequences detected...”
  • “..., alkaline phosphatase 15 PA2635 CTGTCATCGTCCCGTCGC 53 0.39 P.aeruginosa Hypothetical protein G Membrane lipids 1 SMc01848 TCGTCATCAAAGTGTAGC 47 0.41 S.meliloti Hypothetical protein ( btaA -like) 2 Atu2119 CTGTCATCAAACTGTAGC 44 0.58 A.tumefaciens Hypothetical protein ( btaA -like) 3 mlr1574 CTGTCACCGGCCTGTCAT +1 0.55 M.loti Hypothetical protein ( btaA...”

mlr1574 hypothetical protein from Mesorhizobium loti MAFF303099
Aligns to 49:429 / 432 (88.2%), covers 98.4% of PF11899, 381.5 bits

• Accumulation of novel glycolipids and ornithine lipids in Mesorhizobium loti under phosphate deprivation
  Diercks, Journal of bacteriology 2015
  • “...the enzymes BtaA and BtaB (41), with homologs (mlr1574 and mlr1575, respectively) also found in Mesorhizobium. The mesorhizobial BtaA and BtaB homologs are not...”
• A processive glycosyltransferase involved in glycolipid synthesis during phosphate deprivation in Mesorhizobium loti
  Devers, Journal of bacteriology 2011
  • “...compiled by Yuan et al. (36). Interestingly, the mlr1574 gene of Mesorhizobium, which presumably is involved in DGTS synthesis under phosphate deprivation, was...”
  • “...out of 18). Therefore, in contrast to the DGTS gene mlr1574, the pgt gene presumably does not contain a Pho box. These results indicate that Pgt activity might...”
• Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteobacteria
  Yuan, Nucleic acids research 2006
  • “...( btaA -like) 2 Atu2119 CTGTCATCAAACTGTAGC 44 0.58 A.tumefaciens Hypothetical protein ( btaA -like) 3 mlr1574 CTGTCACCGGCCTGTCAT +1 0.55 M.loti Hypothetical protein ( btaA -like) H Exopolysaccharide 1 SMb21317 CTGTCATGCACCTGCATC 385 0.39 S.meliloti expG , activator of exopolysaccharide II synthesis 2 SMc02851 CTTTCAAAGAGCCGCCAC 158 0.37 S.meliloti...”
  • “...predicted 64 nt from the smc01848 start codon and orthologs of smc01848 in M.loti ( mlr1574 ) and Agrobacterium tumefaciens ( atu211 9) also have predicted Pho boxes in the corresponding promoter regions ( Table 5 ). These data strongly suggest that DGTS synthesis induced upon...”

NGR_c21260 DUF3419 family protein from Sinorhizobium fredii NGR234
Aligns to 32:414 / 416 (92.1%), covers 98.7% of PF11899, 374.8 bits

• High-resolution transcriptomic analyses of Sinorhizobium sp. NGR234 bacteroids in determinate nodules of Vigna unguiculata and indeterminate nodules of Leucaena leucocephala
  Li, PloS one 2013
  • “...DGTS (diacylglyceryl-N,N,N-trimethylhomoserine) [48] . In NGR234 bacteroids from two test hosts, btaA and btaB ( NGR_c21260- NGR_c21270 , 47123 folds) involved in the biosynthesis of DGTS were strongly up-regulated, implying that NGR234, regardless of test hosts, could form membrane lipids lacking phosphorus to adapt to the...”

NGR_c21260 putative S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase from Rhizobium sp. NGR234
Aligns to 36:418 / 420 (91.2%), covers 98.7% of PF11899, 374.7 bits

• High-resolution transcriptomic analyses of Sinorhizobium sp. NGR234 bacteroids in determinate nodules of Vigna unguiculata and indeterminate nodules of Leucaena leucocephala
  Li, PloS one 2013
  • “...DGTS (diacylglyceryl-N,N,N-trimethylhomoserine) [48] . In NGR234 bacteroids from two test hosts, btaA and btaB ( NGR_c21260- NGR_c21270 , 47123 folds) involved in the biosynthesis of DGTS were strongly up-regulated, implying that NGR234, regardless of test hosts, could form membrane lipids lacking phosphorus to adapt to the...”

BtaA / Q93TQ1 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase from Cereibacter sphaeroides (see paper)
RSP_0856 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase from Rhodobacter sphaeroides 2.4.1
Aligns to 33:413 / 416 (91.6%), covers 99.0% of PF11899, 359.5 bits

• Diacylglyceryl-N,N,N-trimethylhomoserine-dependent lipid remodeling in a green alga, Chlorella kessleri
  Oishi, Communications biology 2022
  • “...acid sequences of BTA1 homologs were searched in available databases with CrBTA1 (CHLREDRAFT_77062) and BtaA (RSP_0856) and BtaB (RSP_0857) of Rhodobacter sphaeroides 2.4.1 as queries. The homolog sequences of CrBTA1 obtained are summarized in Supplementary Table 2 . The sequences were aligned after editing, including the...”

MED193_17364 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyltransferase from Roseobacter sp. MED193
A3X3R1 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyltransferase from Roseobacter sp. MED193
Aligns to 24:402 / 405 (93.6%), covers 98.7% of PF11899, 343.5 bits

• Bacterial catabolism of membrane phospholipids links marine biogeochemical cycles
  Westermann, Science advances 2023
  • “...4.38 0.00 MED193_17359 A3X3R3 PlcP Phosphodiesterase involved in lipid remodeling ++ 4.40 0.01 N/D N/D MED193_17364 A3X3R1 BtaA S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyltransferase ++ 5.67 0.02 N/D N/D MED193_17614 A3X3L3 PhnI C-P lyase, ribosylation, core complex ++ 4.68 0.02 N/D N/D MED193_17624 A3X3L1 PhnJ C-P lyase, CP bond cleavage,...”
• Bacterial catabolism of membrane phospholipids links marine biogeochemical cycles
  Westermann, Science advances 2023
  • “...0.00 MED193_17359 A3X3R3 PlcP Phosphodiesterase involved in lipid remodeling ++ 4.40 0.01 N/D N/D MED193_17364 A3X3R1 BtaA S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyltransferase ++ 5.67 0.02 N/D N/D MED193_17614 A3X3L3 PhnI C-P lyase, ribosylation, core complex ++ 4.68 0.02 N/D N/D MED193_17624 A3X3L1 PhnJ C-P lyase, CP bond cleavage, core...”

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