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Family Search for PF12012 (DUF3504)

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Running HMMer for PF12012

PF12012 hits 20 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

ZMYM3_MOUSE / Q9JLM4 Zinc finger MYM-type protein 3; DXHXS6673E protein; Zinc finger protein 261 from Mus musculus (Mouse) (see paper)
Aligns to 1186:1353 / 1370 (12.3%), covers 99.4% of PF12012, 221.2 bits

XP_036017934 zinc finger MYM-type protein 3 isoform X4 from Mus musculus
Aligns to 1220:1387 / 1404 (12.0%), covers 99.4% of PF12012, 221.2 bits

ZMYM3_HUMAN / Q14202 Zinc finger MYM-type protein 3; Zinc finger protein 261 from Homo sapiens (Human) (see 3 papers)
Aligns to 1185:1353 / 1370 (12.3%), covers 99.4% of PF12012, 221.0 bits

ZMYM4_HUMAN / Q5VZL5 Zinc finger MYM-type protein 4; Zinc finger protein 262 from Homo sapiens (Human) (see 2 papers)
Aligns to 1356:1526 / 1548 (11.0%), covers 100.0% of PF12012, 221.0 bits

XP_047298589 zinc finger MYM-type protein 3 isoform X2 from Homo sapiens
Aligns to 1173:1341 / 1358 (12.4%), covers 99.4% of PF12012, 220.9 bits

NP_001263010 without children, isoform E from Drosophila melanogaster
Aligns to 1530:1691 / 1702 (9.5%), covers 99.4% of PF12012, 218.7 bits

QRIC1_HUMAN / Q2TAL8 Transcriptional regulator QRICH1; Glutamine-rich protein 1 from Homo sapiens (Human) (see 4 papers)
NP_001307513 transcriptional regulator QRICH1 from Homo sapiens
Aligns to 599:759 / 776 (20.7%), covers 98.8% of PF12012, 213.1 bits

XP_006511872 transcriptional regulator QRICH1 isoform X1 from Mus musculus
Aligns to 600:760 / 777 (20.7%), covers 98.8% of PF12012, 211.8 bits

QRIC1_MOUSE / Q3UA37 Transcriptional regulator QRICH1; Glutamine-rich protein 1 from Mus musculus (Mouse) (see 2 papers)
Aligns to 600:760 / 777 (20.7%), covers 98.8% of PF12012, 211.8 bits

XP_011243522 zinc finger MYM-type protein 2 isoform X1 from Mus musculus
Aligns to 1217:1385 / 1402 (12.1%), covers 99.4% of PF12012, 204.4 bits

ZMYM2_MOUSE / Q9CU65 Zinc finger MYM-type protein 2; Zinc finger protein 198 from Mus musculus (Mouse) (see paper)
Aligns to 1191:1359 / 1376 (12.3%), covers 99.4% of PF12012, 204.4 bits

ZMYM2_HUMAN / Q9UBW7 Zinc finger MYM-type protein 2; Fused in myeloproliferative disorders protein; Rearranged in atypical myeloproliferative disorder protein; Zinc finger protein 198 from Homo sapiens (Human) (see 3 papers)
Aligns to 1192:1360 / 1377 (12.3%), covers 99.4% of PF12012, 204.2 bits

F1MNA8 Zinc finger MYM-type containing 2 from Bos taurus
Aligns to 1190:1358 / 1375 (12.3%), covers 99.4% of PF12012, 202.7 bits

XP_026564670 zinc finger MYM-type protein 2 isoform X1 from Pseudonaja textilis
Aligns to 1138:1307 / 1324 (12.8%), covers 99.4% of PF12012, 196.5 bits

NP_001273965 uncharacterized protein KIAA1958 isoform a from Homo sapiens
Aligns to 560:715 / 744 (21.0%), covers 98.8% of PF12012, 137.2 bits

Q8N8K9 Uncharacterized protein KIAA1958 from Homo sapiens
Aligns to 532:687 / 716 (21.8%), covers 98.8% of PF12012, 137.1 bits

B7PYR4 Woc protein, putative from Ixodes scapularis
2 alignments in 796:909 / 924 (12.3%), covering up to 38.3% of PF12012, 112.1 bits

NP_001120376 uncharacterized protein LOC100145450 from Xenopus tropicalis
Aligns to 385:538 / 679 (22.7%), covers 94.4% of PF12012, 64.4 bits

XP_002125964 uncharacterized protein LOC100186276 from Ciona intestinalis
Aligns to 519:656 / 1007 (13.7%), covers 94.4% of PF12012, 52.4 bits

LOC108785573 uncharacterized protein LOC108785573 from Nanorana parkeri
Aligns to 260:423 / 827 (19.8%), covers 96.3% of PF12012, 44.4 bits

Or search for genetic data about PF12012 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory