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Family Search for PF12130 (bMERB_dom)

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Running HMMer for PF12130

PF12130 hits 50 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

MILK1_BOVIN / E1BBG2 MICAL-like protein 1 from Bos taurus (Bovine) (see 3 papers)
Aligns to 674:806 / 853 (15.6%), covers 99.3% of PF12130, 151.5 bits

MILK1_MOUSE / Q8BGT6 MICAL-like protein 1; Molecule interacting with Rab13; MIRab13 from Mus musculus (Mouse) (see 2 papers)
Aligns to 691:823 / 870 (15.3%), covers 98.5% of PF12130, 151.3 bits

MILK1_RAT / D3ZQL6 MICAL-like protein 1 from Rattus norvegicus (Rat) (see paper)
Aligns to 676:808 / 855 (15.6%), covers 98.5% of PF12130, 151.1 bits

MILK1_HUMAN / Q8N3F8 MICAL-like protein 1; Molecule interacting with Rab13; MIRab13 from Homo sapiens (Human) (see 6 papers)
Aligns to 684:816 / 863 (15.4%), covers 99.3% of PF12130, 151.0 bits

MICA3_HUMAN / Q7RTP6 [F-actin]-monooxygenase MICAL3; Molecule interacting with CasL protein 3; MICAL-3; EC 1.14.13.225 from Homo sapiens (Human) (see 6 papers)
Aligns to 1854:1988 / 2002 (6.7%), covers 100.0% of PF12130, 148.6 bits

MILK2_RAT / D3ZEN0 MICAL-like protein 2; Junctional Rab13-binding protein; Molecule interacting with CasL-like 2; MICAL-L2 from Rattus norvegicus (Rat) (see paper)
Aligns to 851:983 / 1014 (13.1%), covers 98.5% of PF12130, 143.6 bits

MILK2_MOUSE / Q3TN34 MICAL-like protein 2; Junctional Rab13-binding protein; Molecule interacting with CasL-like 2; MICAL-L2 from Mus musculus (Mouse) (see 6 papers)
Aligns to 846:978 / 1009 (13.2%), covers 98.5% of PF12130, 142.3 bits

MILK2_HUMAN / Q8IY33 MICAL-like protein 2; Junctional Rab13-binding protein; Molecule interacting with CasL-like 2; MICAL-L2 from Homo sapiens (Human) (see 2 papers)
Aligns to 740:872 / 904 (14.7%), covers 99.3% of PF12130, 139.4 bits

MCA2B_DANRE / F1RA39 [F-actin]-monooxygenase mical2b; Molecule interacting with CasL protein 2B; MICAL-2; EC 1.14.13.225 from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
Aligns to 1530:1665 / 1679 (8.1%), covers 99.3% of PF12130, 139.3 bits

MICA2_HUMAN / O94851 [F-actin]-monooxygenase MICAL2; MICAL C-terminal-like protein; Mical-cL; Molecule interacting with CasL protein 2; MICAL-2; EC 1.14.13.225 from Homo sapiens (Human) (see 5 papers)
Aligns to 1809:1943 / 1957 (6.9%), covers 99.3% of PF12130, 136.8 bits

MICA2_MOUSE / Q8BML1 [F-actin]-monooxygenase MICAL2; ERK2-binding testicular protein 1; MICAL C-terminal-like protein; Mical-cL; Molecule interacting with CasL protein 2; MICAL-2; mMical2; EC 1.14.13.225 from Mus musculus (Mouse) (see 5 papers)
Q8BML1 F-actin monooxygenase (EC 1.14.13.225) from Mus musculus (see paper)
Aligns to 1802:1937 / 1951 (7.0%), covers 99.3% of PF12130, 134.1 bits

EHBP1_HUMAN / Q8NDI1 EH domain-binding protein 1 from Homo sapiens (Human) (see 3 papers)
Aligns to 1074:1210 / 1231 (11.1%), covers 98.5% of PF12130, 131.7 bits

EHBP1_MOUSE / Q69ZW3 EH domain-binding protein 1 from Mus musculus (Mouse) (see paper)
Aligns to 1074:1210 / 1231 (11.1%), covers 98.5% of PF12130, 130.7 bits

EH1L1_HUMAN / Q8N3D4 EH domain-binding protein 1-like protein 1 from Homo sapiens (Human) (see paper)
Aligns to 1363:1499 / 1523 (9.0%), covers 98.5% of PF12130, 128.9 bits

EH1L1_MOUSE / Q99MS7 EH domain-binding protein 1-like protein 1; Tangerin from Mus musculus (Mouse) (see paper)
Aligns to 1556:1692 / 1716 (8.0%), covers 98.5% of PF12130, 124.4 bits

MICA1_HUMAN / Q8TDZ2 [F-actin]-monooxygenase MICAL1; Molecule interacting with CasL protein 1; MICAL-1; NEDD9-interacting protein with calponin homology and LIM domains; EC 1.14.13.225; EC 1.6.3.1 from Homo sapiens (Human) (see 11 papers)
Q8TDZ2 F-actin monooxygenase (EC 1.14.13.225) from Homo sapiens (see 2 papers)
Aligns to 931:1061 / 1067 (12.3%), covers 94.8% of PF12130, 118.0 bits

MICA1_MOUSE / Q8VDP3 [F-actin]-monooxygenase MICAL1; Molecule interacting with CasL protein 1; MICAL-1; mMical1; NEDD9-interacting protein with calponin homology and LIM domains; EC 1.14.13.225; EC 1.6.3.1 from Mus musculus (Mouse) (see 6 papers)
Q8VDP3 F-actin monooxygenase (EC 1.14.13.225) from Mus musculus (see paper)
Aligns to 918:1047 / 1048 (12.4%), covers 95.5% of PF12130, 112.4 bits

MICAL_DROME / Q86BA1 [F-actin]-monooxygenase Mical; Molecule interacting with CasL protein homolog; EC 1.14.13.225 from Drosophila melanogaster (Fruit fly) (see 5 papers)
Q86BA1 F-actin monooxygenase (EC 1.14.13.225) from Drosophila melanogaster (see 4 papers)
Aligns to 4563:4697 / 4723 (2.9%), covers 88.8% of PF12130, 88.7 bits

Or search for genetic data about PF12130 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory