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Family Search for PF12478 (UBAP2-Lig)

PF12478 hits 15 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

LIG_AEDAE / Q16VD3 Protein lingerer from Aedes aegypti (Yellowfever mosquito) (Culex aegypti) (see paper)
Aligns to 538:572 / 1250 (2.8%), covers 100.0% of PF12478, 71.3 bits

LIG_DROME / Q86S05 Protein lingerer from Drosophila melanogaster (Fruit fly) (see 3 papers)
Aligns to 575:610 / 1375 (2.6%), covers 100.0% of PF12478, 71.3 bits

NP_995778 lingerer, isoform C from Drosophila melanogaster
Aligns to 575:610 / 1343 (2.7%), covers 100.0% of PF12478, 71.3 bits

UBAP2_HUMAN / Q5T6F2 Ubiquitin-associated protein 2; UBAP-2; RNA polymerase II degradation factor UBAP2 from Homo sapiens (Human) (see 2 papers)
NP_060919 ubiquitin-associated protein 2 isoform 1 from Homo sapiens
Aligns to 512:544 / 1119 (2.9%), covers 100.0% of PF12478, 64.0 bits

XP_006538287 ubiquitin-associated protein 2 isoform X2 from Mus musculus
Q91VX2 Ubiquitin-associated protein 2 from Mus musculus
Aligns to 512:544 / 1132 (2.9%), covers 100.0% of PF12478, 61.1 bits

Q4V8A7 Atp8b2 protein from Rattus norvegicus
Aligns to 520:551 / 580 (5.5%), covers 97.0% of PF12478, 59.7 bits

NP_705693 ubiquitin-associated protein 2-like isoform 2 from Mus musculus
Aligns to 495:526 / 1067 (3.0%), covers 97.0% of PF12478, 58.8 bits

NP_001019969 ubiquitin-associated protein 2-like from Rattus norvegicus
Aligns to 515:546 / 1105 (2.9%), covers 97.0% of PF12478, 58.8 bits

UBP2L_MOUSE / Q80X50 Ubiquitin-associated protein 2-like; RNA polymerase II degradation factor Ubap2l from Mus musculus (Mouse) (see 2 papers)
Aligns to 515:546 / 1107 (2.9%), covers 97.0% of PF12478, 58.8 bits

NP_001120792 ubiquitin-associated protein 2-like isoform b from Homo sapiens
Aligns to 495:526 / 983 (3.3%), covers 97.0% of PF12478, 58.8 bits

UBP2L_HUMAN / Q14157 Ubiquitin-associated protein 2-like; Protein NICE-4; RNA polymerase II degradation factor UBAP2L from Homo sapiens (Human) (see 6 papers)
Aligns to 495:526 / 1087 (2.9%), covers 97.0% of PF12478, 58.7 bits

F8W726 Ubiquitin associated protein 2 like from Homo sapiens
Aligns to 506:537 / 1079 (3.0%), covers 97.0% of PF12478, 58.7 bits

W5NVV3 Uncharacterized protein from Ovis aries
Aligns to 495:526 / 1087 (2.9%), covers 97.0% of PF12478, 58.7 bits

NP_001076535 ubiquitin-associated protein 2-like from Danio rerio
Aligns to 534:565 / 1144 (2.8%), covers 93.9% of PF12478, 56.6 bits

K1RJ91 Ubiquitin-associated protein 2 from Magallana gigas
Aligns to 527:556 / 1396 (2.1%), covers 78.8% of PF12478, 46.2 bits

Or search for genetic data about PF12478 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory