Family Search for PF12480 (DUF3699)
PF12480.8 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
FA71B_HUMAN / Q8TC56 Protein FAM71B from Homo sapiens (Human) (see paper)
Aligns to 116:186 / 605 (11.7%), covers 98.6% of PF12480, 103.6 bits
Q96KD3 Protein FAM71F1 from Homo sapiens
Aligns to 140:208 / 344 (20.1%), covers 98.6% of PF12480, 94.7 bits
- Proteomic Differences in Blood Plasma Associated with Antidepressant Treatment Response.
Turck, Frontiers in molecular neuroscience 2017 - “...activity Q96PY6 Serine/threonine-protein kinase Nek1 NEK1 >5.00 Cell communication Serine/threonine kinase Protein serine/threonine kinase activity Q96KD3 Protein FAM71F1 FAM71F1 >5.00 Unknown Unclassified Molecular function unknown Q92750 Transcription initiation factor TFIID subunit 4B TAF4B >5.00 Cell growth and maintenance Transcription factor Transcription factor activity P12814 Alpha-actinin-1 ACTN1...”
XP_011514438 protein FAM71F2 isoform X4 from Homo sapiens
Aligns to 22:90 / 214 (32.2%), covers 97.2% of PF12480, 90.3 bits
Q6NXP2 Protein FAM71F2 from Homo sapiens
Aligns to 117:185 / 309 (22.3%), covers 97.2% of PF12480, 89.4 bits
NP_705834 protein FAM71A from Homo sapiens
Q8IYT1 Protein FAM71A from Homo sapiens
Aligns to 115:184 / 594 (11.8%), covers 97.2% of PF12480, 88.3 bits
NP_001138874 protein FAM71E2 from Homo sapiens
Q8N5Q1 Protein FAM71E2 from Homo sapiens
Aligns to 97:167 / 922 (7.7%), covers 95.8% of PF12480, 86.4 bits
NP_001269718 protein FAM71F1 isoform 3 from Homo sapiens
Aligns to 39:109 / 243 (29.2%), covers 100.0% of PF12480, 81.9 bits
XP_011534805 protein FAM71D isoform X1 from Homo sapiens
Aligns to 115:185 / 422 (16.8%), covers 97.2% of PF12480, 80.4 bits
D3YV92 Family with sequence similarity 71, member D from Mus musculus
Aligns to 114:184 / 440 (16.1%), covers 98.6% of PF12480, 79.9 bits
- Identification of tissue-enriched novel transcripts and novel exons in mice.
Hong, BMC genomics 2014 - “...Different 5UTR tNE-3 Skp2 chr15:9082539-9082780 242 - Q9Z0Z3 Different 5UTR tNE-4 Fam71d chr12:79824797-79824939 143 + D3YV92 26 shorter AA, different C term tNE-5 Fam71d chr12:79796826-79797030 205 + D3YV92 Different 5UTR tNE-6 Rfx1 chr8:86608465-86608794 330 + tNE-7 Fam71d chr12:79823117-79823280 164 + D3YV92 tNE-8 Pfkm chr15:97925522-97925641 120 +...”
XP_030098915 protein FAM71E1 isoform X10 from Mus musculus
Aligns to 1:63 / 175 (36.0%), covers 84.5% of PF12480, 60.9 bits
Q6IPT2 Protein FAM71E1 from Homo sapiens
Aligns to 175:241 / 247 (27.1%), covers 77.5% of PF12480, 52.3 bits
- Predicting Functions of Uncharacterized Human Proteins: From Canonical to Proteoforms.
Poverennaya, Genes 2020 - “...was assigned for the largest number of proteins (24 proteins). For 10 proteins (A2RUT3, A6PVS8, Q6IPT2, Q6IPT2-2, Q7Z5L2, Q8N3J3, Q8N3J3-3, Q8TD91, Q8TD91-2, Q9HA90), a combination of biological processes including proteolysis (GO:0006508), cognition (GO:0050890), and regulation of cell migration (GO:0030334) was predicted. For 19 proteins (rightmost column),...”
- “...for 93 uPE1 proteins. * denotes the following set of proteins: A2RUT3, A6PVS8, Q2NL68, Q4KMZ1, Q6IPT2, Q6IPT2-2, Q7Z5L2, Q8N3J3, Q8N3J3-3, Q8TD91, Q8TD91-2, Q9H741, Q9HA90, Q9NWQ9. ** denotes the following set of proteins: Q0P6D6, Q2M3V2, Q53LP3, Q68CR1, Q6P995, Q6ZRI6-2, Q86X40, Q8IV32, Q8IW50, Q8N6V9, Q8NCJ5, Q8NCT3, Q8NCU4, Q8NEF3,...”
Or search for genetic data about PF12480 in the Fitness Browser
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory