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Family Search for PF13148 (DUF3987)

PF13148.6 hits 14 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

YfjI / b2625 CP4-57 prophage; protein YfjI from Escherichia coli K-12 substr. MG1655 (see paper)
b2625 CP4-57 prophage; predicted protein (NCBI) from Escherichia coli str. K-12 substr. MG1655
P52124 Protein YfjI from Escherichia coli (strain K12)
Aligns to 28:389 / 469 (77.2%), covers 99.7% of PF13148, 337.5 bits

BT1703 hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Aligns to 170:538 / 612 (60.3%), covers 99.7% of PF13148, 311.4 bits

SO1442 conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Aligns to 38:399 / 489 (74.0%), covers 99.5% of PF13148, 311.2 bits

BCAL1122 hypothetical protein (RefSeq) from Burkholderia cenocepacia J2315
Aligns to 33:397 / 485 (75.3%), covers 100.0% of PF13148, 308.9 bits

ETEC_4464 DUF3987 domain-containing protein from Escherichia coli ETEC H10407
Aligns to 31:392 / 494 (73.3%), covers 99.7% of PF13148, 304.5 bits

c1170 Hypothetical protein yfjI (NCBI ptt file) from Escherichia coli CFT073
Aligns to 37:397 / 486 (74.3%), covers 99.7% of PF13148, 281.4 bits

BMEI1696 Hypothetical Membrane Spanning Protein (NCBI ptt file) from Brucella melitensis 16M
Aligns to 60:425 / 509 (71.9%), covers 99.2% of PF13148, 276.8 bits

Z1126 unknown (NCBI ptt file) from Escherichia coli O157:H7 EDL933
Aligns to 37:381 / 467 (73.9%), covers 99.7% of PF13148, 255.0 bits

pSf2_083 hypothetical protein from Shigella phage pSf-2
Aligns to 77:441 / 522 (69.9%), covers 96.2% of PF13148, 149.3 bits

SRU_0231 hypothetical protein (NCBI) from Salinibacter ruber DSM 13855
Aligns to 148:557 / 686 (59.8%), covers 98.6% of PF13148, 124.3 bits

LI0175 hyphotheical protein (NCBI) from Lawsonia intracellularis PHE/MN1-00
Aligns to 105:465 / 554 (65.2%), covers 94.0% of PF13148, 116.4 bits

NE0232 hypothetical protein (NCBI ptt file) from Nitrosomonas europaea ATCC 19718
Aligns to 143:388 / 462 (53.2%), covers 65.8% of PF13148, 104.1 bits

B5X54_RS04285 DUF3987 domain-containing protein from Caldicellulosiruptor bescii
Aligns to 163:365 / 452 (44.9%), covers 60.8% of PF13148, 46.5 bits

YkgS CP4-6 prophage; protein YkgS from Escherichia coli K-12 substr. MG1655 (see paper)
YKGS_ECOLI / P0DPM8 Protein YkgS from Escherichia coli (strain K12) (see paper)
Aligns to 1:42 / 42 (100.0%), covers 10.4% of PF13148, 31.1 bits

Or search for genetic data about PF13148 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory