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Family Search for PF13252 (DUF4043)

PF13252.6 hits 9 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NGK_0673 putative phage associated protein (RefSeq) from Neisseria gonorrhoeae NCCP11945
B4RKL3 Putative phage associated protein from Neisseria gonorrhoeae (strain NCCP11945)
Aligns to 56:422 / 431 (85.2%), covers 99.7% of PF13252, 467.2 bits

NGO1090 hypothetical protein, putative phage associated protein (NCBI) from Neisseria gonorrhoeae FA 1090
Aligns to 56:422 / 431 (85.2%), covers 99.7% of PF13252, 467.1 bits

ECs1223 hypothetical protein (NCBI ptt file) from Escherichia coli O157:H7 str. Sakai
Z1479 unknown protein encoded by bacteriophage BP-933W (NCBI ptt file) from Escherichia coli O157:H7 EDL933
EDL933_1401 N4-gp56 family major capsid protein from Escherichia coli O157:H7 str. EDL933
Aligns to 52:400 / 404 (86.4%), covers 99.4% of PF13252, 466.0 bits

DelCs14_4061 N4-gp56 family major capsid protein from Delftia sp. Cs1-4
Aligns to 41:366 / 371 (87.9%), covers 99.4% of PF13252, 352.5 bits

PEp14_00010 hypothetical protein from Erwinia phage PEp14
Aligns to 38:358 / 365 (87.9%), covers 99.7% of PF13252, 277.5 bits

CAPSD_BPKP2 / C0HJH8 Major capsid protein; Major structural protein; Major virion protein from Pseudomonas phage KPP25 (Bacteriophage KPP25) (see paper)
Aligns to 44:374 / 376 (88.0%), covers 99.4% of PF13252, 126.1 bits

Hac_1621 conserved hypothetical protein CUP0939 (NCBI) from Helicobacter acinonychis str. Sheeba
Aligns to 132:376 / 380 (64.5%), covers 60.1% of PF13252, 49.3 bits

HCD_00925 DUF4043 family protein from Helicobacter cetorum MIT 99-5656
Aligns to 128:377 / 389 (64.3%), covers 60.3% of PF13252, 45.8 bits

I7H0H9 Major structural protein ORF14 from Helicobacter pylori bacteriophage KHP30
Aligns to 135:377 / 381 (63.8%), covers 55.5% of PF13252, 45.3 bits

Or search for genetic data about PF13252 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory